RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

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Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 NUCKS1Q9H1E3 243 aaKnown RBP28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 FHOD1Q9Y613 1164 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 FRMPD4Q14CM0 1322 aa28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 CTAGE15A4D2H0 777 aa28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 CTAGE8P0CG41 777 aa28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 ALAS1P13196 640 aa28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 GMPSP49915 693 aaPredicted RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 MAPK8IP2Q13387 824 aaPredicted RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 BMS1Q14692 1282 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 PAPD7Q5XG87 772 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 CTAGE6Q86UF2 777 aa28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 CTAGE4Q8IX94 777 aa28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 SYN2Q92777 582 aaPredicted RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 SECISBP2LQ93073 1101 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 RAVER2Q9HCJ3 691 aaKnown RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 PPP1R1BQ9UD71 204 aaPredicted RBP28.17■■■□□ 2.1
SMARCD3-203ENST00000392811 TLR2O60603 784 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 USO1O60763 962 aaKnown RBP28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 AKAP3O75969 853 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 SFMBT2Q5VUG0 894 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 MCF2L2Q86YR7 1114 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 SLC38A10Q9HBR0 1119 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 GINM1Q9NU53 330 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 SSU72P8A0A1W2PR75 194 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 SEC31AO94979 1220 aaKnown RBP28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 BCRP11274 1271 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 NMT1P30419 496 aaKnown RBP28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 GHRHRQ02643 423 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 LXNQ9BS40 222 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 ANKZF1Q9H8Y5 726 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 PARVGQ9HBI0 331 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 SAR1BQ9Y6B6 198 aa28.16■■■□□ 2.1
SMARCD3-203ENST00000392811 DDX39AO00148 427 aaKnown RBP28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 EIF3DO15371 548 aaKnown RBP eCLIP28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 RPL13P26373 211 aaKnown RBP28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 TUBB4BP68371 445 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 TBC1D10BQ4KMP7 808 aaPredicted RBP28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 MUM1L1Q5H9M0 696 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 KRT222Q8N1A0 295 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 BANK1Q8NDB2 785 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 GANQ9H2C0 597 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 KCNH7Q9NS40 1196 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 PKD2L1Q9P0L9 805 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 HACL1Q9UJ83 578 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 ZMYM2Q9UBW7 1377 aa28.15■■■□□ 2.1
SMARCD3-203ENST00000392811 TGFB1I1O43294 461 aa28.14■■■□□ 2.1
SMARCD3-203ENST00000392811 PNMA6AP0CW24 399 aaPredicted RBP28.14■■■□□ 2.1
SMARCD3-203ENST00000392811 TDRD12Q587J7 1177 aaKnown RBP28.14■■■□□ 2.1
SMARCD3-203ENST00000392811 CC2D1AQ6P1N0 951 aaPredicted RBP28.14■■■□□ 2.1
SMARCD3-203ENST00000392811 HOMER2Q9NSB8 354 aa28.14■■■□□ 2.1
SMARCD3-203ENST00000392811 CLIC2O15247 247 aa28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 SLC16A3O15427 465 aaKnown RBP28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 FLOT1O75955 427 aa28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 AFPP02771 609 aaKnown RBP28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 SERPING1P05155 500 aa28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 CASP4P49662 377 aa28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 GFPT1Q06210 699 aaPredicted RBP28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 MTMR2Q13614 643 aa28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 SLC9C1Q4G0N8 1177 aa28.14■■■□□ 2.09
SMARCD3-203ENST00000392811 XRCC5P13010 732 aaKnown RBP28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 VCAM1P19320 739 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 MAGEA1P43355 309 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 ZNF131P52739 623 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 ZC2HC1CQ53FD0 456 aaPredicted RBP28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 NIPA1Q7RTP0 329 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 IKZF4Q9H2S9 585 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 KCND2Q9NZV8 630 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 CNOT7Q9UIV1 285 aaKnown RBP28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 PPP1R9AQ9ULJ8 1098 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 GJA3Q9Y6H8 435 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 ANO9A1A5B4 782 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 SRGAP2O75044 1071 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 NBPF12Q5TAG4 269 aaPredicted RBP28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 MSANTD4Q8NCY6 345 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 SYTL5Q8TDW5 730 aaPredicted RBP28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 FIZ1Q96SL8 496 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 MLXIPQ9HAP2 919 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 METTL14Q9HCE5 456 aaKnown RBP28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 SEL1LQ9UBV2 794 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 BCS1LQ9Y276 419 aa28.13■■■□□ 2.09
SMARCD3-203ENST00000392811 EPB41P11171 864 aaKnown RBP28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 TKFCQ3LXA3 575 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 PCNX4Q63HM2 1172 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 DPY19L2P1Q6NXN4 242 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 MIER3Q7Z3K6 550 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 NEK9Q8TD19 979 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 MTFR1LQ9H019 292 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 ODF2LQ9ULJ1 636 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 UBIAD1Q9Y5Z9 338 aa28.12■■■□□ 2.09
SMARCD3-203ENST00000392811 DHX15O43143 795 aaKnown RBP28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 MRPS9P82933 396 aaKnown RBP28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 RASSF7Q02833 373 aa28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 RAPGEF1Q13905 1077 aa28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 DCAF17Q5H9S7 520 aaPredicted RBP28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 RPAP3Q9H6T3 665 aaPredicted RBP28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 CAPN6Q9Y6Q1 641 aa28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 POTEB2H3BUK9 544 aa28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 RBAK-RBAKDNI3L0D1 243 aa28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 PJA2O43164 708 aa28.11■■■□□ 2.09
SMARCD3-203ENST00000392811 ACTN1P12814 892 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms