RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
SCN3B-202ENST00000392770 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 SLFN12LQ6IEE8 588 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 CEP63Q96MT8 703 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 CEP72Q9P209 647 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 FCER1AP12319 257 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 ATF2P15336 505 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 SFNP31947 248 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 INTS8Q75QN2 995 aaKnown RBP17.98■□□□□ 0.47
SCN3B-202ENST00000392770 C2orf69Q8N8R5 385 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 RNF8O76064 485 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 NDUFB10O96000 172 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
SCN3B-202ENST00000392770 KNOP1Q1ED39 458 aaKnown RBP17.98■□□□□ 0.47
SCN3B-202ENST00000392770 ACAD9Q9H845 621 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 CNOT7Q9UIV1 285 aaKnown RBP17.98■□□□□ 0.47
SCN3B-202ENST00000392770 ZNF233A6NK53 670 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 CD58P19256 250 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 BFSP1Q12934 665 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 PHLDB2Q86SQ0 1253 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 KCNB2Q92953 911 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 POLLQ9UGP5 575 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 SYNJ2BP-COX16A0A087WUM0 186 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 BSPRYQ5W0U4 402 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 RPF1Q9H9Y2 349 aaKnown RBP17.98■□□□□ 0.47
SCN3B-202ENST00000392770 COX16Q9P0S2 106 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 QARSP47897 775 aaKnown RBP17.97■□□□□ 0.47
SCN3B-202ENST00000392770 HHATQ5VTY9 493 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 PALM2Q8IXS6 379 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 DPEP1P16444 411 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 HMGCS2P54868 508 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 SWSAP1Q6NVH7 229 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 SCARA5Q6ZMJ2 495 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 GABBR1Q9UBS5 961 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 MAD2L2Q9UI95 211 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 NPHP3-ACAD11A0A0J9YXS1 232 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 A6NNZ2 444 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
SCN3B-202ENST00000392770 MTRQ99707 1265 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 SEPT10Q9P0V9 454 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 PASKQ96RG2 1323 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 GOLGA8KD6RF30 607 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 CCDC6Q16204 474 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 MMP19Q99542 508 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 SNX25Q9H3E2 840 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 ABT1Q9ULW3 272 aaKnown RBP17.97■□□□□ 0.47
SCN3B-202ENST00000392770 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
SCN3B-202ENST00000392770 B4GALNT4Q76KP1 1039 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 RFX6Q8HWS3 928 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 MCPH1Q8NEM0 835 aa17.97■□□□□ 0.47
SCN3B-202ENST00000392770 RGS16O15492 202 aaPredicted RBP17.96■□□□□ 0.47
SCN3B-202ENST00000392770 R3HDM1Q15032 1099 aaKnown RBP17.96■□□□□ 0.47
SCN3B-202ENST00000392770 SURF1Q15526 300 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 RUNDC3BQ96NL0 473 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 KDM4FA0A1W2PPD8 638 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 MED7O43513 233 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 MYL3P08590 195 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 FAM167AQ96KS9 214 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 DNAJC12Q9UKB3 198 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 TAB3Q8N5C8 712 aaPredicted RBP17.96■□□□□ 0.47
SCN3B-202ENST00000392770 TYW1Q9NV66 732 aaKnown RBP17.96■□□□□ 0.47
SCN3B-202ENST00000392770 LRRC53A6NM62 1247 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 SEC31AO94979 1220 aaKnown RBP17.96■□□□□ 0.47
SCN3B-202ENST00000392770 LGSNQ5TDP6 509 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 PLCD3Q8N3E9 789 aa17.96■□□□□ 0.47
SCN3B-202ENST00000392770 ZNF148Q9UQR1 794 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 JRKLQ9Y4A0 524 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 GOLGA8SH3BPF8 625 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 PDIA5Q14554 519 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 HAUS1Q96CS2 278 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 LDHAP00338 332 aaKnown RBP17.95■□□□□ 0.46
SCN3B-202ENST00000392770 MGARPQ8TDB4 240 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 A6NJR5 290 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 ABL1P00519 1130 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 PSMC5P62195 406 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 GABPB1Q06547 395 aaPredicted RBP17.95■□□□□ 0.46
SCN3B-202ENST00000392770 RINT1Q6NUQ1 792 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 P3H4Q92791 437 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 NUB1Q9Y5A7 615 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 KCNH2Q12809 1159 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
SCN3B-202ENST00000392770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.95■□□□□ 0.46
SCN3B-202ENST00000392770 TEX33O43247 280 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 FDX1P10109 184 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 PPP4CP60510 307 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 GABPAQ06546 454 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 PGRMC1O00264 195 aaKnown RBP17.94■□□□□ 0.46
SCN3B-202ENST00000392770 ZMYND10O75800 440 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 DPYDQ12882 1025 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 MYO1EQ12965 1108 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 NAALADL2Q58DX5 795 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 PPP1R2P3Q6NXS1 205 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 C3orf67Q6ZVT6 689 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 GABPB2Q8TAK5 448 aaPredicted RBP17.94■□□□□ 0.46
SCN3B-202ENST00000392770 FAM151AQ8WW52 585 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 JMJD4Q9H9V9 463 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms