RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ERO1AQ96HE7 468 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 WNK4Q96J92 1243 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 CHP1Q99653 195 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 ZSWIM4Q9H7M6 989 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 PARVGQ9HBI0 331 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 WRAP73Q9P2S5 460 aaPredicted RBP22.14■■□□□ 1.13
PTPN11-202ENST00000392597 ZNF214Q9UL59 606 aaPredicted RBP22.14■■□□□ 1.13
PTPN11-202ENST00000392597 LYPLA2O95372 231 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 GUCY2CP25092 1073 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 CASQ1P31415 396 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 HOXD13P35453 343 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 ITGB3BPQ13352 177 aaPredicted RBP22.13■■□□□ 1.13
PTPN11-202ENST00000392597 MTERF4Q7Z6M4 381 aaKnown RBP22.13■■□□□ 1.13
PTPN11-202ENST00000392597 CCDC170Q8IYT3 715 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 KIF5CO60282 957 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 MYBP10242 640 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 NR2F2P24468 414 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 PPP2R3AQ06190 1150 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 ARHGEF16Q5VV41 709 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 MAP1SQ66K74 1059 aaPredicted RBP22.13■■□□□ 1.13
PTPN11-202ENST00000392597 SNRNP48Q6IEG0 339 aaKnown RBP22.13■■□□□ 1.13
PTPN11-202ENST00000392597 NSMFQ6X4W1 530 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 HOXC10Q9NYD6 342 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 DBR1Q9UK59 544 aaKnown RBP22.13■■□□□ 1.13
PTPN11-202ENST00000392597 FZD1Q9UP38 647 aa22.13■■□□□ 1.13
PTPN11-202ENST00000392597 ARHGEF35A5YM69 484 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 ADM5C9JUS6 153 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 FANCGO15287 622 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 USP2O75604 605 aaPredicted RBP22.12■■□□□ 1.13
PTPN11-202ENST00000392597 GCNT3O95395 438 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 RPL13P26373 211 aaKnown RBP22.12■■□□□ 1.13
PTPN11-202ENST00000392597 NFIL3Q16649 462 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 ARHGAP29Q52LW3 1261 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 STXBP4Q6ZWJ1 553 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 FRMD5Q7Z6J6 570 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 ACRBPQ8NEB7 543 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 TSC1Q92574 1164 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 WDR24Q96S15 920 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 TEX13BQ9BXU2 312 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 MYO1AQ9UBC5 1043 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 PLAGL2Q9UPG8 496 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 RIPK3Q9Y572 518 aa22.12■■□□□ 1.13
PTPN11-202ENST00000392597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.12■■□□□ 1.13
PTPN11-202ENST00000392597 CCND2P30279 289 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 CYLC1P35663 651 aaPredicted RBP22.11■■□□□ 1.13
PTPN11-202ENST00000392597 BAATQ14032 418 aaPredicted RBP22.11■■□□□ 1.13
PTPN11-202ENST00000392597 MYCT1Q8N699 235 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 BANK1Q8NDB2 785 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 MAP7D2Q96T17 732 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 LZTFL1Q9NQ48 299 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 ZNF215Q9UL58 517 aaPredicted RBP22.11■■□□□ 1.13
PTPN11-202ENST00000392597 PAPPA2Q9BXP8 1791 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 ZBTB39O15060 712 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 SLC16A3O15427 465 aaKnown RBP22.11■■□□□ 1.13
PTPN11-202ENST00000392597 MAFGO15525 162 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 PRPF6O94906 941 aaKnown RBP22.11■■□□□ 1.13
PTPN11-202ENST00000392597 CHADLQ6NUI6 762 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 ZNF662Q6ZS27 426 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 VSIG10LQ86VR7 867 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 NEK11Q8NG66 645 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 ANKRD7Q92527 254 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 MMRN2Q9H8L6 949 aa22.11■■□□□ 1.13
PTPN11-202ENST00000392597 DDX39AO00148 427 aaKnown RBP22.1■■□□□ 1.13
PTPN11-202ENST00000392597 MYCLP12524 364 aaPredicted RBP22.1■■□□□ 1.13
PTPN11-202ENST00000392597 SFNP31947 248 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 QARSP47897 775 aaKnown RBP22.1■■□□□ 1.13
PTPN11-202ENST00000392597 JAK3P52333 1124 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 KRT83P78385 493 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 NCBP1Q09161 790 aaKnown RBP22.1■■□□□ 1.13
PTPN11-202ENST00000392597 TMEM132BQ14DG7 1078 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 RDM1Q8NG50 284 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 GPRASP2Q96D09 838 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 FAM207AQ9NSI2 230 aaPredicted RBP22.1■■□□□ 1.13
PTPN11-202ENST00000392597 ASTN1O14525 1302 aa22.1■■□□□ 1.13
PTPN11-202ENST00000392597 MYH11P35749 1972 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 KRT76Q01546 638 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 ZNF710Q8N1W2 664 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 NSUN6Q8TEA1 469 aaKnown RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 NUCKS1Q9H1E3 243 aaKnown RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 METTL14Q9HCE5 456 aaKnown RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 PKD2L1Q9P0L9 805 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 SNCAIPQ9Y6H5 919 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 LOC285556D6RIA3 1793 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 PTPRFP10586 1907 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 EIF3CLB5ME19 914 aaKnown RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 VGLL4Q14135 290 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 ZNF720Q7Z2F6 126 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 FIZ1Q96SL8 496 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 EIF3CQ99613 913 aaKnown RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 ACAD9Q9H845 621 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 ARMCX3Q9UH62 379 aaPredicted RBP22.09■■□□□ 1.13
PTPN11-202ENST00000392597 TCEAL9Q9UHQ7 104 aa22.09■■□□□ 1.13
PTPN11-202ENST00000392597 SPDYE16A6NNV3 312 aaPredicted RBP22.08■■□□□ 1.13
PTPN11-202ENST00000392597 URI1O94763 535 aaPredicted RBP22.08■■□□□ 1.13
PTPN11-202ENST00000392597 NR3C1P04150 777 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 NR3C2P08235 984 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 ARHGAP25P42331 645 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 RBM10P98175 930 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms