RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 EEF2KMTQ96G04 330 aa23.62■■□□□ 1.37
SPHK1-202ENST00000392496 B4DLN1 442 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 MFAP3LO75121 409 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 CNMDO75829 334 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 RGS20O76081 388 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 OSBPP22059 807 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 COPB2P35606 906 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 ZNF131P52739 623 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 EDRF1Q3B7T1 1238 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 MIIPQ5JXC2 388 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 CEP135Q66GS9 1140 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 NELFCDQ8IXH7 590 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 C4orf19Q8IY42 314 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 MRPL44Q9H9J2 332 aaKnown RBP23.61■■□□□ 1.37
SPHK1-202ENST00000392496 PARVGQ9HBI0 331 aa23.61■■□□□ 1.37
SPHK1-202ENST00000392496 TRAF5O00463 557 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 PES1O00541 588 aaKnown RBP23.6■■□□□ 1.37
SPHK1-202ENST00000392496 GNA14O95837 355 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 SLC25A27O95847 323 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 CCNE2O96020 404 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 KCNA2P16389 499 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 CASP5P51878 434 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 MAN2A1Q16706 1144 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 KNOP1Q1ED39 458 aaKnown RBP23.6■■□□□ 1.37
SPHK1-202ENST00000392496 E4F1Q66K89 784 aaPredicted RBP23.6■■□□□ 1.37
SPHK1-202ENST00000392496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.6■■□□□ 1.372e-6■■■■□ 19.5
SPHK1-202ENST00000392496 SPATA31C2B4DYI2 1134 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 EIF3DO15371 548 aaKnown RBP eCLIP23.6■■□□□ 1.37
SPHK1-202ENST00000392496 CASP14P31944 242 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 PSMC5P62195 406 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 FSTL1Q12841 308 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 SNAPC2Q13487 334 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 STXBP2Q15833 593 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 GPAT2Q6NUI2 795 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 SLC10A4Q96EP9 437 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 NAA15Q9BXJ9 866 aaKnown RBP23.6■■□□□ 1.37
SPHK1-202ENST00000392496 MOV10L1Q9BXT6 1211 aaKnown RBP23.6■■□□□ 1.37
SPHK1-202ENST00000392496 TRAF3IP3Q9Y228 551 aa23.6■■□□□ 1.37
SPHK1-202ENST00000392496 CCP110O43303 1012 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 TBC1D8BQ0IIM8 1120 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 VWA3BQ502W6 1294 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 NCAPG2Q86XI2 1143 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 SMAP1Q8IYB5 467 aaPredicted RBP23.59■■□□□ 1.37
SPHK1-202ENST00000392496 MYCT1Q8N699 235 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 CPLX3Q8WVH0 158 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 PAGR1Q9BTK6 254 aa23.59■■□□□ 1.37
SPHK1-202ENST00000392496 USP27XA6NNY8 438 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 PDXKO00764 312 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 PEX10O60683 326 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 EIF3JO75822 258 aaKnown RBP23.58■■□□□ 1.37
SPHK1-202ENST00000392496 MYBP10242 640 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 ICAM3P32942 547 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 GJA5P36382 358 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 FXR1P51114 621 aaKnown RBP eCLIP23.58■■□□□ 1.37
SPHK1-202ENST00000392496 ALDH5A1P51649 535 aaPredicted RBP23.58■■□□□ 1.37
SPHK1-202ENST00000392496 MARSP56192 900 aaKnown RBP23.58■■□□□ 1.37
SPHK1-202ENST00000392496 FKBP15Q5T1M5 1219 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 PADI6Q6TGC4 694 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 ERGIC2Q96RQ1 377 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 PCDHA10Q9Y5I2 948 aa23.58■■□□□ 1.37
SPHK1-202ENST00000392496 UBE4BO95155 1302 aa23.58■■□□□ 1.36
SPHK1-202ENST00000392496 POTEB2H3BUK9 544 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 GCNT3O95395 438 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 FECHP22830 423 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 YWHABP31946 246 aaKnown RBP23.57■■□□□ 1.36
SPHK1-202ENST00000392496 HOXD13P35453 343 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 RARRES1P49788 294 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 CNTN2Q02246 1040 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 NUP58Q9BVL2 599 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 ANKEF1Q9NU02 776 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 SFI1A8K8P3 1242 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 CALUO43852 315 aaPredicted RBP23.57■■□□□ 1.36
SPHK1-202ENST00000392496 PRPF6O94906 941 aaKnown RBP23.57■■□□□ 1.36
SPHK1-202ENST00000392496 RETREG2Q8NC44 543 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 TIPINQ9BVW5 301 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 NDST4Q9H3R1 872 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 TYW1Q9NV66 732 aaKnown RBP23.57■■□□□ 1.36
SPHK1-202ENST00000392496 RBPJLQ9UBG7 517 aa23.57■■□□□ 1.36
SPHK1-202ENST00000392496 ASTN1O14525 1302 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 MYH11P35749 1972 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 CETN3O15182 167 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 DKC1O60832 514 aaKnown RBP eCLIP23.56■■□□□ 1.36
SPHK1-202ENST00000392496 ERCC3P19447 782 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 UGCGQ16739 394 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 STXBP4Q6ZWJ1 553 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 FIZ1Q96SL8 496 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 ZNF408Q9H9D4 720 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 POLD4Q9HCU8 107 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 JPH1Q9HDC5 661 aaPredicted RBP23.56■■□□□ 1.36
SPHK1-202ENST00000392496 TRMT1Q9NXH9 659 aaKnown RBP23.56■■□□□ 1.36
SPHK1-202ENST00000392496 WDR81Q562E7 1941 aa23.56■■□□□ 1.36
SPHK1-202ENST00000392496 HIP1RO75146 1068 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 EDNRBP24530 442 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 FKBP1BP68106 108 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 MAPK7Q13164 816 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 ADAM9Q13443 819 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 CCDC40Q4G0X9 1142 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 FAM133AQ8N9E0 248 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 IQCDQ96DY2 449 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 C16orf45Q96MC5 204 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms