RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 MYO1CO00159 1063 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 EIF3HO15372 352 aaKnown RBP eCLIP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 E2F6O75461 281 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 NPR1P16066 1061 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 PMLP29590 882 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CA8P35219 290 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 HERC4Q5GLZ8 1057 aaPredicted RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 TMTC4Q5T4D3 741 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 PRR23CQ6ZRP0 262 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 SUPT20HQ8NEM7 779 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 NAT9Q9BTE0 207 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 EHD2Q9NZN4 543 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CDH16O75309 829 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 RASA1P20936 1047 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 LIG3P49916 1009 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 POTEEQ6S8J3 1075 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 MIGA2Q7L4E1 593 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 FBXO18Q8NFZ0 1043 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 TSSK1BQ9BXA7 367 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CDY2AQ9Y6F7 541 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CDY1Q9Y6F8 540 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 RPL22P35268 128 aaKnown RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 RAB25P57735 213 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 P3H1Q32P28 736 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 APPBP2Q92624 585 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 DHX36Q9H2U1 1008 aaKnown RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 ATAD3AQ9NVI7 634 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 MAPRE3Q9UPY8 281 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 SYNCRIPO60506 623 aaKnown RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CHRNA3P32297 505 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 SLFN12LQ6IEE8 588 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 LRRC8AQ8IWT6 810 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 PPP1R14BQ96C90 147 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 TRPC7Q9HCX4 862 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 DKK3Q9UBP4 350 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 TBC1D4O60343 1298 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 RPN1P04843 607 aaKnown RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 ARMCX4Q5H9R4 360 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 ZMYND12Q9H0C1 365 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CENPXA8MT69 81 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 H3BRJ5 948 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 PDE9AO76083 593 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 BYSLQ13895 437 aaKnown RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 C16orf89Q6UX73 402 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 TRIM59Q8IWR1 403 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 CEP70Q8NHQ1 597 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 PHACTR1Q9C0D0 580 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 FOXP1Q9H334 677 aaPredicted RBP10.57□□□□□ -0.72
VLDLR-203ENST00000382100 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 NEK6Q9HC98 313 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
VLDLR-203ENST00000382100 GDF11O95390 407 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 PUM3Q15397 648 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 TXNDC2Q86VQ3 553 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ATP11CQ8NB49 1132 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SMARCAD1Q9H4L7 1026 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 UNC13CQ8NB66 2214 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 NVLO15381 856 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 TBC1D12O60347 775 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SLC9A1P19634 815 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 CTTNQ14247 550 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 TERF2Q15554 542 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SNX30Q5VWJ9 437 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 RTL3Q8N8U3 475 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 OTULINQ96BN8 352 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ZNF556Q9HAH1 456 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 KLHL2O95198 593 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 LDHBP07195 334 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 MECOMQ03112 1051 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 CCDC15Q0P6D6 951 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 WLSQ5T9L3 541 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 PRPF18Q99633 342 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 OPLAHO14841 1288 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 RGS5O15539 181 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 KATNA1O75449 491 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 PTPRZ1P23471 2315 aaPredicted RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ADKP55263 362 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 PCNX4Q63HM2 1172 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 NEK10Q6ZWH5 1172 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 MLPHQ9BV36 600 aaPredicted RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 DDX28Q9NUL7 540 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 ATICP31939 592 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SARM1Q6SZW1 724 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 EFHD2Q96C19 240 aaPredicted RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 CHAMP1Q96JM3 812 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 DDX56Q9NY93 547 aaKnown RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 VWA3AA6NCI4 1184 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 HADHAP40939 763 aa10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SESN2P58004 480 aaPredicted RBP10.56□□□□□ -0.72
VLDLR-203ENST00000382100 SLC20A2Q08357 652 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms