RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CFBP00751 764 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 EPB41P11171 864 aaKnown RBP17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 NOVP48745 357 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 KLHL30Q0D2K2 578 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 MEI1Q5TIA1 1274 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 TRIM59Q8IWR1 403 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 BCAS3Q9H6U6 928 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 EFCC1Q9HA90 598 aa17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 ZNF277Q9NRM2 450 aaPredicted RBP17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 BMP2KQ9NSY1 1161 aaPredicted RBP17.83■□□□□ 0.44
NKX3-1-201ENST00000380871 SHTN1A0MZ66 631 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 TNFRSF8P28908 595 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 FBXW10Q5XX13 1052 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 DDX42Q86XP3 938 aaKnown RBP eCLIP17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 ADAMTSL1Q8N6G6 1762 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 SPDYE3A6NKU9 549 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 NDUFAB1O14561 156 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 RUBCNQ92622 972 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 DHX36Q9H2U1 1008 aaKnown RBP17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 PKD2L1Q9P0L9 805 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 PCDHA2Q9Y5H9 948 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 YDJCA8MPS7 323 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 KCNK3O14649 394 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 PTK2Q05397 1052 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 GBP6Q6ZN66 633 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 OR2W6PQ8NHA6 318 aa17.82■□□□□ 0.44
NKX3-1-201ENST00000380871 A0A087WUV0 522 aaPredicted RBP17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 SLC9A1P19634 815 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 SEC24CP53992 1094 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 PSMC6P62333 389 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 AP1M1Q9BXS5 423 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 PCDHGC5Q9Y5F6 944 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 MYH7BA7E2Y1 1941 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 SFI1A8K8P3 1242 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 PLSCR1O15162 318 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 SKOR1P84550 965 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 PAK2Q13177 524 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 PSMD2Q13200 908 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 LARGE2Q8N3Y3 721 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 AMNQ9BXJ7 453 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 GANQ9H2C0 597 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 KCTD10Q9H3F6 313 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 CENPHQ9H3R5 247 aa17.81■□□□□ 0.44
NKX3-1-201ENST00000380871 hCG_1984214I3L0E3 225 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ERLIN2O94905 339 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 PLA2G4BP0C869 781 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ADAM9Q13443 819 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ZNF713Q8N859 430 aaPredicted RBP17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 TMOD2Q9NZR1 351 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 MED24O75448 989 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 BMP3P12645 472 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 EPS15P42566 896 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ERVK-9P63128 1117 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 KCNH2Q12809 1159 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 GLE1Q53GS7 698 aaKnown RBP17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 SYDE2Q5VT97 1194 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ZNF571Q7Z3V5 609 aaPredicted RBP17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 FLAD1Q8NFF5 587 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 FAM107BQ9H098 131 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ASIC2Q16515 512 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 ICE2Q659A1 982 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 CNKSR1Q969H4 720 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 EDEM3Q9BZQ6 932 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 TSKSQ9UJT2 592 aa17.8■□□□□ 0.44
NKX3-1-201ENST00000380871 HPDP32754 393 aaPredicted RBP17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 HLTFQ14527 1009 aaKnown RBP eCLIP17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 MAATS1Q7Z4T9 603 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 USP38Q8NB14 1042 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 EMILIN3Q9NT22 766 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 NYAP2Q9P242 653 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 AJAP1Q9UKB5 411 aaPredicted RBP17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 MEIS2O14770 477 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 CYP11B2P19099 503 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 LSP1P33241 339 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 CLK2P49760 499 aaKnown RBP17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 ARSHQ5FYA8 562 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 PPP4R3AQ6IN85 833 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 PLAAQ9Y263 795 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
NKX3-1-201ENST00000380871 CPP00450 1065 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 NR1D1P20393 614 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 NR2F2P24468 414 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 SYN2Q92777 582 aaPredicted RBP17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 IKZF4Q9H2S9 585 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 RGL1Q9NZL6 768 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 CEP85LQ5SZL2 805 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 GJB7Q6PEY0 223 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 NEUROG2Q9H2A3 272 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 SRCAPQ6ZRS2 3230 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 RXRBP28702 533 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 ECHS1P30084 290 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 KIAA1755Q5JYT7 1200 aa17.78■□□□□ 0.44
NKX3-1-201ENST00000380871 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms