RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 TRAF5O00463 557 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 STX10O60499 249 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 EIF3JO75822 258 aaKnown RBP23.76■■□□□ 1.39
GMDS-202ENST00000380815 GYPCP04921 128 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 TPM1P09493 284 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 PSMC5P62195 406 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 MIIPQ5JXC2 388 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 CEP135Q66GS9 1140 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.76■■□□□ 1.39
GMDS-202ENST00000380815 CNGA4Q8IV77 575 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 NELFCDQ8IXH7 590 aa23.76■■□□□ 1.39
GMDS-202ENST00000380815 BAG1Q99933 345 aaPredicted RBP23.76■■□□□ 1.39
GMDS-202ENST00000380815 NOC4LQ9BVI4 516 aaKnown RBP23.76■■□□□ 1.39
GMDS-202ENST00000380815 B4DLN1 442 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 CNTN2Q02246 1040 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 KNOP1Q1ED39 458 aaKnown RBP23.75■■□□□ 1.39
GMDS-202ENST00000380815 ZC3H3Q8IXZ2 948 aaKnown RBP23.75■■□□□ 1.39
GMDS-202ENST00000380815 SMAP1Q8IYB5 467 aaPredicted RBP23.75■■□□□ 1.39
GMDS-202ENST00000380815 CCAR2Q8N163 923 aaKnown RBP23.75■■□□□ 1.39
GMDS-202ENST00000380815 CCDC51Q96ER9 411 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 RBPJLQ9UBG7 517 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 PCDHA10Q9Y5I2 948 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 ASTN1O14525 1302 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 PES1O00541 588 aaKnown RBP23.75■■□□□ 1.39
GMDS-202ENST00000380815 ARHGAP6O43182 974 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 MFAP3LO75121 409 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 ALDH5A1P51649 535 aaPredicted RBP23.75■■□□□ 1.39
GMDS-202ENST00000380815 FKBP1BP68106 108 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 PADI6Q6TGC4 694 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 MYCT1Q8N699 235 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 TRAF3IP3Q9Y228 551 aa23.75■■□□□ 1.39
GMDS-202ENST00000380815 POTEB2H3BUK9 544 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 EIF3DO15371 548 aaKnown RBP eCLIP23.74■■□□□ 1.39
GMDS-202ENST00000380815 GNA14O95837 355 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 ERCC3P19447 782 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 CASP14P31944 242 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 YWHABP31946 246 aaKnown RBP23.74■■□□□ 1.39
GMDS-202ENST00000380815 ICAM3P32942 547 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 RARRES1P49788 294 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 DNTTIP2Q5QJE6 756 aaKnown RBP23.74■■□□□ 1.39
GMDS-202ENST00000380815 E4F1Q66K89 784 aaPredicted RBP23.74■■□□□ 1.39
GMDS-202ENST00000380815 ZNF408Q9H9D4 720 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 TXNRD2Q9NNW7 524 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 KIAA1217Q5T5P2 1943 aa23.74■■□□□ 1.39
GMDS-202ENST00000380815 SFI1A8K8P3 1242 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 PDXKO00764 312 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 MYBP10242 640 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 HOXD13P35453 343 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 TBC1D8BQ0IIM8 1120 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 MAN2A1Q16706 1144 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 FAM133AQ8N9E0 248 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 NAA15Q9BXJ9 866 aaKnown RBP23.73■■□□□ 1.39
GMDS-202ENST00000380815 JPH1Q9HDC5 661 aaPredicted RBP23.73■■□□□ 1.39
GMDS-202ENST00000380815 GCNT3O95395 438 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 EDNRBP24530 442 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 UGCGQ16739 394 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 VWA3BQ502W6 1294 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 CPLX3Q8WVH0 158 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 ERGIC2Q96RQ1 377 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 POLD4Q9HCU8 107 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 ANKEF1Q9NU02 776 aa23.73■■□□□ 1.39
GMDS-202ENST00000380815 USP27XA6NNY8 438 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 PRPF6O94906 941 aaKnown RBP23.72■■□□□ 1.39
GMDS-202ENST00000380815 FXR1P51114 621 aaKnown RBP eCLIP23.72■■□□□ 1.39
GMDS-202ENST00000380815 MARSP56192 900 aaKnown RBP23.72■■□□□ 1.39
GMDS-202ENST00000380815 FKBP15Q5T1M5 1219 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 FIZ1Q96SL8 496 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 NDST4Q9H3R1 872 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 BCAS3Q9H6U6 928 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 SLC9A2Q9UBY0 812 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 UBE4BO95155 1302 aa23.72■■□□□ 1.39
GMDS-202ENST00000380815 SOWAHBA6NEL2 793 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 NKRFO15226 690 aaKnown RBP eCLIP23.71■■□□□ 1.392e-7■■■□□ 16.6
GMDS-202ENST00000380815 CALUO43852 315 aaPredicted RBP23.71■■□□□ 1.39
GMDS-202ENST00000380815 MAPK7Q13164 816 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 ADAM9Q13443 819 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 STXBP4Q6ZWJ1 553 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 RETREG2Q8NC44 543 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 GTF3C2Q8WUA4 911 aaPredicted RBP23.71■■□□□ 1.39
GMDS-202ENST00000380815 TIPINQ9BVW5 301 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 TYW1Q9NV66 732 aaKnown RBP23.71■■□□□ 1.39
GMDS-202ENST00000380815 PNMA3Q9UL41 463 aa23.71■■□□□ 1.39
GMDS-202ENST00000380815 DKC1O60832 514 aaKnown RBP eCLIP23.7■■□□□ 1.391e-6■■■■■ 48.9
GMDS-202ENST00000380815 HIP1RO75146 1068 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 PSAPP07602 524 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 Q3C1V9 767 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 ZNF720Q7Z2F6 126 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 FAM178BQ8IXR5 827 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 ATP6V0A1Q93050 837 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 NUP58Q9BVL2 599 aa23.7■■□□□ 1.39
GMDS-202ENST00000380815 CETN3O15182 167 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 CCP110O43303 1012 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 FECHP22830 423 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 FSTL1Q12841 308 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 ODR4Q5SWX8 454 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 DAW1Q8N136 415 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 CCDC43Q96MW1 224 aaKnown RBP23.7■■□□□ 1.38
GMDS-202ENST00000380815 MROH8Q9H579 483 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 SLC45A1Q9Y2W3 748 aa23.7■■□□□ 1.38
GMDS-202ENST00000380815 CETPP11597 493 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms