RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 C1orf186Q6ZWK4 172 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 TRIM58Q8NG06 486 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 PIGOQ8TEQ8 1089 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 TEPSINQ96N21 525 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 PARVGQ9HBI0 331 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 ODF2LQ9ULJ1 636 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 CTDP1Q9Y5B0 961 aaPredicted RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 PCDHA13Q9Y5I0 950 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 SAR1BQ9Y6B6 198 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 ZNF536O15090 1300 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 MYBP10242 640 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 USP14P54578 494 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 GHRHRQ02643 423 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 TRAPPC11Q7Z392 1133 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 LSM14BQ9BX40 385 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 TSPYL1Q9H0U9 437 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 TACC1O75410 805 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 SERPING1P05155 500 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 ARP10275 920 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 XRCC5P13010 732 aaKnown RBP13.87□□□□□ -0.19
VPS16-202ENST00000380445 CCDC155Q8N6L0 562 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 PARD6BQ9BYG5 372 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 LACRTQ9GZZ8 138 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 ZSWIM4Q9H7M6 989 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 UBE4BO95155 1302 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 RPTORQ8N122 1335 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 RSPH10B2B2RC85 870 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 ZRANB2O95218 330 aaKnown RBP eCLIP13.87□□□□□ -0.19
VPS16-202ENST00000380445 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
VPS16-202ENST00000380445 NR3C1P04150 777 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 PLEKP08567 350 aaPredicted RBP13.87□□□□□ -0.19
VPS16-202ENST00000380445 RSPH10BP0C881 870 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 BRD3Q15059 726 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 NFIL3Q16649 462 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 B3GNT9Q6UX72 402 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 ARFGAP3Q9NP61 516 aa13.87□□□□□ -0.19
VPS16-202ENST00000380445 FRMPD4Q14CM0 1322 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 CCDC151A5D8V7 595 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 ERICH4A6NGS2 130 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 PPP1R12BO60237 982 aaPredicted RBP13.86□□□□□ -0.19
VPS16-202ENST00000380445 NOL4O94818 638 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
VPS16-202ENST00000380445 CKAP4Q07065 602 aaKnown RBP13.86□□□□□ -0.19
VPS16-202ENST00000380445 TDRD12Q587J7 1177 aaKnown RBP13.86□□□□□ -0.19
VPS16-202ENST00000380445 DCAF15Q66K64 600 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 PLCB1Q9NQ66 1216 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 RCCD1A6NED2 376 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 ZNF263O14978 683 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 ZBTB7AO95365 584 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 ALAS1P13196 640 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 HOXD13P35453 343 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 PCNX4Q63HM2 1172 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 CLEC4DQ8WXI8 215 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 ZBTB9Q96C00 473 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 ALS2CR12Q96Q35 445 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 EPC1Q9H2F5 836 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
VPS16-202ENST00000380445 JRKLQ9Y4A0 524 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 FHOD1Q9Y613 1164 aa13.86□□□□□ -0.19
VPS16-202ENST00000380445 MACROD2A1Z1Q3 448 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 ZBED4O75132 1171 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 PNMA6AP0CW24 399 aaPredicted RBP13.85□□□□□ -0.19
VPS16-202ENST00000380445 MAGEA1P43355 309 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 ZNF131P52739 623 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 ASTE1Q2TB18 679 aaPredicted RBP13.85□□□□□ -0.19
VPS16-202ENST00000380445 FAM178BQ8IXR5 827 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 LXNQ9BS40 222 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 AIPL1Q9NZN9 384 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 NFKBIEO00221 500 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 NFIBO00712 420 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 PJA2O43164 708 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 FLOT1O75955 427 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 ITGB5P18084 799 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 GUCY2CP25092 1073 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 HGSNATQ68CP4 663 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 CC2D1AQ6P1N0 951 aaPredicted RBP13.85□□□□□ -0.19
VPS16-202ENST00000380445 MIER3Q7Z3K6 550 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 MSANTD4Q8NCY6 345 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 CRACR2AQ9BSW2 395 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 ASTN1O14525 1302 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms