RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.23□□□□□ -1.41
DDX58-201ENST00000379868 PANK4Q9NVE7 773 aa6.23□□□□□ -1.41
DDX58-201ENST00000379868 MAP3K20Q9NYL2 800 aaKnown RBP6.23□□□□□ -1.41
DDX58-201ENST00000379868 MORC2Q9Y6X9 1032 aaPredicted RBP6.23□□□□□ -1.41
DDX58-201ENST00000379868 DENND3A2RUS2 1198 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 SMTNL1A8MU46 457 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 K7ERI5 159 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 ZNF500O60304 480 aaPredicted RBP6.22□□□□□ -1.41
DDX58-201ENST00000379868 SNHG28P0DPA3 235 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 NDUFA8P51970 172 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 POSTNQ15063 836 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 KIAA0753Q2KHM9 967 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 FAM26FQ5R3K3 315 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 TMEM143Q96AN5 459 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 FRMD4BQ9Y2L6 1034 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 PCDHB13Q9Y5F0 798 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 RASSF10A6NK89 507 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 STAM2O75886 525 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 CMA1P23946 247 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
DDX58-201ENST00000379868 THPOP40225 353 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 PNOCQ13519 176 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 EPHA7Q15375 998 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 XKR3Q5GH77 459 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 PCNX4Q63HM2 1172 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 ARL6IP4Q66PJ3 421 aaKnown RBP6.22□□□□□ -1.41
DDX58-201ENST00000379868 IQSEC1Q6DN90 963 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 METTL7BQ6UX53 244 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 CACNA2D4Q7Z3S7 1137 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 VSIG10LQ86VR7 867 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 POMGNT1Q8WZA1 660 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 CCDC127Q96BQ5 260 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 KCNG1Q9UIX4 513 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 GABRQQ9UN88 632 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 MEIS2O14770 477 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 PPP1R11O60927 126 aaPredicted RBP6.22□□□□□ -1.41
DDX58-201ENST00000379868 YWHABP31946 246 aaKnown RBP6.22□□□□□ -1.41
DDX58-201ENST00000379868 LRRC41Q15345 812 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 STX1AQ16623 288 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 ZBTB33Q86T24 672 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 RNF149Q8NC42 400 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 MCPH1Q8NEM0 835 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 MS4A4AQ96JQ5 239 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 RIT2Q99578 217 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 DNAJC25Q9H1X3 360 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 ATP6V0A4Q9HBG4 840 aa6.22□□□□□ -1.41
DDX58-201ENST00000379868 SRPRBQ9Y5M8 271 aaKnown RBP6.22□□□□□ -1.41
DDX58-201ENST00000379868 FAM86B1E9PN63 330 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 NR1I2O75469 434 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 FAM86B2P0C5J1 330 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 TGFB3P10600 412 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 TNNI1P19237 187 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 YARSP54577 528 aaKnown RBP6.21□□□□□ -1.41
DDX58-201ENST00000379868 TAF12Q16514 161 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 ARMCX5Q6P1M9 558 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 DEFB128Q7Z7B8 93 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 PPFIBP1Q86W92 1011 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 EXOC8Q8IYI6 725 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 SPC24Q8NBT2 197 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 DEF6Q9H4E7 631 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 TMEM39AQ9NV64 488 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 SETD4Q9NVD3 440 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 SNED1Q8TER0 1413 aa6.21□□□□□ -1.41
DDX58-201ENST00000379868 N4BP3O15049 544 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 CETN3O15182 167 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 COBLO75128 1261 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 PPP6R2O75170 966 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 DLATP10515 647 aaKnown RBP6.21□□□□□ -1.42
DDX58-201ENST00000379868 UBA1P22314 1058 aaKnown RBP6.21□□□□□ -1.42
DDX58-201ENST00000379868 METTL16Q86W50 562 aaKnown RBP6.21□□□□□ -1.42
DDX58-201ENST00000379868 SMAP1Q8IYB5 467 aaPredicted RBP6.21□□□□□ -1.42
DDX58-201ENST00000379868 THNSL1Q8IYQ7 743 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 MICAL1Q8TDZ2 1067 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 CPLX3Q8WVH0 158 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 MTRQ99707 1265 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 MTIF3Q9H2K0 278 aaKnown RBP6.21□□□□□ -1.42
DDX58-201ENST00000379868 PARVGQ9HBI0 331 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 TUBE1Q9UJT0 475 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 NUB1Q9Y5A7 615 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 HBP1O60381 514 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 LPXNO60711 386 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 PLA2G6O60733 806 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 U2AF2P26368 475 aaKnown RBP eCLIP6.21□□□□□ -1.42
DDX58-201ENST00000379868 CASP1P29466 404 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.42
DDX58-201ENST00000379868 KCNJ6P48051 423 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 CLCN3P51790 818 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 SOX10P56693 466 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 TRPC3Q13507 836 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 MAPK6Q16659 721 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 ODF2Q5BJF6 829 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 SAMD3Q8N6K7 520 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 NEK9Q8TD19 979 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 TCP11Q8WWU5 503 aa6.21□□□□□ -1.42
DDX58-201ENST00000379868 ZNHIT6Q9NWK9 470 aaKnown RBP6.21□□□□□ -1.42
DDX58-201ENST00000379868 C17orf102A2RUQ5 167 aa6.2□□□□□ -1.42
DDX58-201ENST00000379868 PRMT2P55345 433 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms