RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 HLFQ16534 295 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 EAPPQ56P03 285 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 BHMTQ93088 406 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 TLR10Q9BXR5 811 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 AZI2Q9H6S1 392 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 SH2D4AQ9H788 454 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 PCDHA13Q9Y5I0 950 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ABCC12Q96J65 1359 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ABCA6Q8N139 1617 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 UNCXA6NJT0 531 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 CAPN9O14815 690 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 OR6B1O95007 311 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 LMNAP02545 664 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 IFI35P80217 286 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 KHDC1Q4VXA5 237 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 TCP11X2Q5H9J9 407 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 NT5DC1Q5TFE4 455 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 USPL1Q5W0Q7 1092 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 CCDC174Q6PII3 467 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 LRRC74BQ6ZQY2 392 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 SLC43A3Q8NBI5 491 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ALG1Q9BT22 464 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 TRIM31Q9BZY9 425 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 NEUROG2Q9H2A3 272 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 ATAD3AQ9NVI7 634 aa9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 FAF1Q9UNN5 650 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-201ENST00000379599 PREX1Q8TCU6 1659 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 KLF18A0A0U1RQI7 1052 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 OXSR1O95747 527 aaPredicted RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 FTCDO95954 541 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 IL13P35225 146 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 SLCO1A2P46721 670 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 CCT7Q99832 543 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 TBC1D10AQ9BXI6 508 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 ASCC2Q9H1I8 757 aaPredicted RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 DPH5Q9H2P9 285 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 CAPN11Q9UMQ6 739 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 TIMM22Q9Y584 194 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 MED23Q9ULK4 1368 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 MYH15Q9Y2K3 1946 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 FAM237AA0A1B0GTK4 181 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 DAPK3O43293 454 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 ADAMTS2O95450 1211 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 PLEKP08567 350 aaPredicted RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 PIP4K2AP48426 406 aaPredicted RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 OCRLQ01968 901 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 CUL1Q13616 776 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 PARP6Q2NL67 630 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 WASHC2DQ5SRD0 308 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 ZNF662Q6ZS27 426 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 MB21D1Q8N884 522 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 HELBQ8NG08 1087 aaPredicted RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 STMN2Q93045 179 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 TLCD1Q96CP7 247 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 PLVAPQ9BX97 442 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 SYNCQ9H7C4 482 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 PACSIN2Q9UNF0 486 aaPredicted RBP9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 CARD8Q9Y2G2 431 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 MAST1Q9Y2H9 1570 aa9.19□□□□□ -0.94
NHLRC3-201ENST00000379599 KRT36O76013 467 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 MAGEA1P43355 309 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 KRT40Q6A162 431 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 KLHL35Q6PF15 583 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 USP49Q70CQ1 688 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 ANKRD42Q8N9B4 389 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 NRG4Q8WWG1 115 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 NAP1L3Q99457 506 aaPredicted RBP9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 MRGBPQ9NV56 204 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 MYH10P35580 1976 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 SPHKAPQ2M3C7 1700 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 SIGLEC16A6NMB1 481 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 ZNF263O14978 683 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 TIMM44O43615 452 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 COL6A2P12110 1019 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 CCNB1P14635 433 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 RXRGP48443 463 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 RASSF2P50749 326 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 NEK3P51956 506 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 PDE1CQ14123 709 aaPredicted RBP9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 SATL1Q86VE3 508 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 ERP27Q96DN0 273 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 NOX5Q96PH1 765 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 ZNF184Q99676 751 aaPredicted RBP9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 DKK3Q9UBP4 350 aa9.18□□□□□ -0.94
NHLRC3-201ENST00000379599 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms