RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 HPCAL4Q9UM19 191 aa11.79□□□□□ -0.52
LINC00654-201ENST00000379053 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
LINC00654-201ENST00000379053 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 RASSF2P50749 326 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 HMGCS2P54868 508 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 NFIXQ14938 502 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 CC2D1AQ6P1N0 951 aaPredicted RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 SDCCAG3Q96C92 435 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 LMBRD1Q9NUN5 540 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 ZNRF3Q9ULT6 936 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 RPAP1Q9BWH6 1393 aaPredicted RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 KPNA2P52292 529 aaKnown RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 GTF3C2Q8WUA4 911 aaPredicted RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 PDCD6IPQ8WUM4 868 aaKnown RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 UTYO14607 1347 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 MYL1P05976 194 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 PRELPP51888 382 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 VEPH1Q14D04 833 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 ZNF394Q53GI3 561 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 FAM133AQ8N9E0 248 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 FAM114A2Q9NRY5 505 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 ZNF668Q96K58 619 aaPredicted RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 SNAP23O00161 211 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
LINC00654-201ENST00000379053 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 LMNTD2Q8IXW0 634 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 CEP120Q8N960 986 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 PPP2R2CQ9Y2T4 447 aa11.78□□□□□ -0.52
LINC00654-201ENST00000379053 PLEKHG2Q9H7P9 1386 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 PLEKHA8P1O95397 391 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 CASP14P31944 242 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 IL1RL1Q01638 556 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 HVCN1Q96D96 273 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.52
LINC00654-201ENST00000379053 SLFN14P0C7P3 912 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 CFAP43Q8NDM7 1665 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 LIFRP42702 1097 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 FCGRTP55899 365 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 ACCSLQ4AC99 568 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.53
LINC00654-201ENST00000379053 RPAP3Q9H6T3 665 aaPredicted RBP11.77□□□□□ -0.53
LINC00654-201ENST00000379053 EFCAB8A8MWE9 144 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 ZBED1O96006 694 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
LINC00654-201ENST00000379053 GABPB1Q06547 395 aaPredicted RBP11.77□□□□□ -0.53
LINC00654-201ENST00000379053 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 TEX2Q8IWB9 1127 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 GRAMD1CQ8IYS0 662 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 FGD4Q96M96 766 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 ERVK-7P63135 1459 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 PPP6R3Q5H9R7 873 aaPredicted RBP11.77□□□□□ -0.53
LINC00654-201ENST00000379053 SPOPLQ6IQ16 392 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.53
LINC00654-201ENST00000379053 KDM5AP29375 1690 aaKnown RBP11.76□□□□□ -0.53
LINC00654-201ENST00000379053 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
LINC00654-201ENST00000379053 BZW1Q7L1Q6 419 aaKnown RBP11.76□□□□□ -0.53
LINC00654-201ENST00000379053 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 HSPH1Q92598 858 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 C2orf40Q9H1Z8 148 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 GABBR1Q9UBS5 961 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 PSMA2P25787 234 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 PCGF5Q86SE9 256 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 F5H6K3 240 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 GPC3P51654 580 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 KLRC3Q07444 240 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
LINC00654-201ENST00000379053 OR6J1Q8NGC5 347 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 SLC13A4Q9UKG4 626 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 STRIP2Q9ULQ0 834 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 RGS12O14924 1447 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00654-201ENST00000379053 FDX1P10109 184 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 SFNP31947 248 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 INPP5BP32019 993 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 ZNF445P59923 1031 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 KIAA1755Q5JYT7 1200 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 MIPOL1Q8TD10 442 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 LRGUKQ96M69 825 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 CPVLQ9H3G5 476 aa11.76□□□□□ -0.53
LINC00654-201ENST00000379053 PTCH1Q13635 1447 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms