RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 SLC39A2Q9NP94 309 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 BLOC1S4Q9NUP1 217 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 SPATS2LQ9NUQ6 558 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 NCANO14594 1321 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 MYMKA6NI61 221 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 PP2D1A8MPX8 630 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CTNND1O60716 968 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 ATP5HO75947 161 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 NEBLO76041 1014 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 ATF3P18847 181 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 DHX9Q08211 1270 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CCDC15Q0P6D6 951 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 TCEAL1Q15170 157 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 TNFAIP8L3Q5GJ75 292 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 SOGA3Q5TF21 947 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 KRT79Q5XKE5 535 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 SPTY2D1Q68D10 685 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 MFSD5Q6N075 450 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 PPP1R18Q6NYC8 613 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 PEX26Q7Z412 305 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CCDC65Q8IXS2 484 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 SH3TC2Q8TF17 1288 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 LRRC15Q8TF66 581 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 VTI1AQ96AJ9 217 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 HES6Q96HZ4 224 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CARD9Q9H257 536 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 KCNMB3Q9NPA1 279 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 DCP1AQ9NPI6 582 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CNOT8Q9UFF9 292 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 MAD2L2Q9UI95 211 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 A0A087X0T9 212 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 PODXLO00592 558 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 H2AFZP0C0S5 128 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 FAM228BP0C875 321 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 NQO1P15559 274 aaKnown RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 POLR2FP61218 127 aaKnown RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 NAA25Q14CX7 972 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 DENND2CQ68D51 928 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 H2AFVQ71UI9 128 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 ADGRA1Q86SQ6 560 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 ANKRD13CQ8N6S4 541 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 GRAMD1AQ96CP6 724 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 METTL14Q9HCE5 456 aaKnown RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 AMFRQ9UKV5 643 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 TRPC6Q9Y210 931 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 PITPNM2Q9BZ72 1349 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 CCNT1O60563 726 aaKnown RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 SUN1O94901 812 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 MMEP08473 750 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 FERP16591 822 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 TMOD1P28289 359 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 EPS15P42566 896 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 HADHBP55084 474 aaKnown RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 CHRNDQ07001 517 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 RAPGEF1Q13905 1077 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 GALNTL6Q49A17 601 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 DUPD1Q68J44 220 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 TOM1L2Q6ZVM7 507 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 MORC4Q8TE76 937 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 RAB3IPQ96QF0 476 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 ERP44Q9BS26 406 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 TAOK3Q9H2K8 898 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 MTRF1LQ9UGC7 380 aaKnown RBP8.93□□□□□ -0.98
PTPRR-203ENST00000378778 BAIAP2L1Q9UHR4 511 aa8.93□□□□□ -0.98
PTPRR-203ENST00000378778 TRAF5O00463 557 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 CETN3O15182 167 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 RGS16O15492 202 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 OAS1P00973 400 aaKnown RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 LACTBP83111 547 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 SPDYAQ5MJ70 313 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 CDCA2Q69YH5 1023 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 IRF2BP2Q7Z5L9 587 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 SYNE4Q8N205 404 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 SAAL1Q96ER3 474 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 PNMA5Q96PV4 448 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 TRIM7Q9C029 511 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 INTS9Q9NV88 658 aaKnown RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 NAGPAQ9UK23 515 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 BCL9O00512 1426 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 SLC16A3O15427 465 aaKnown RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 DAPK3O43293 454 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 CHN1P15882 459 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 LMNB1P20700 586 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 PMS2P54278 862 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 NAPAP54920 295 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 MRPS25P82663 173 aaKnown RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 CALCRLQ16602 461 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 NBPF20Q3BBV1 942 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 ALKBH5Q6P6C2 394 aaKnown RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 HEATR3Q7Z4Q2 680 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 NSMCE1Q8WV22 266 aa8.92□□□□□ -0.98
PTPRR-203ENST00000378778 NSUN4Q96CB9 384 aaKnown RBP8.92□□□□□ -0.98
PTPRR-203ENST00000378778 ABCA3Q99758 1704 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms