RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 AKT3Q9Y243 479 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 TTLL3Q9Y4R7 772 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 PGRMC1O00264 195 aaKnown RBP14.33□□□□□ -0.12
NPHP4-203ENST00000378169 NMT1P30419 496 aaKnown RBP14.33□□□□□ -0.12
NPHP4-203ENST00000378169 SNX1Q13596 522 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 BCAS4Q8TDM0 211 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 GOLGA8SH3BPF8 625 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 GYS2P54840 703 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 PLTPP55058 493 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 PALMO75781 387 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 MAPK4P31152 587 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF394Q53GI3 561 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 VGLL2Q8N8G2 317 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 MAP3K14Q99558 947 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 THAP12O43422 761 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 PSAPP07602 524 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 ARL1P40616 181 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-203ENST00000378169 PDIA5Q14554 519 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 CCDC6Q16204 474 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 CASC4Q6P4E1 433 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 TC2NQ8N9U0 490 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 RAB20Q9NX57 234 aa14.32□□□□□ -0.12
NPHP4-203ENST00000378169 FER1L4A9Z1Z3 1794 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 NCK2O43639 380 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 BUB1BO60566 1050 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-203ENST00000378169 CNGA1P29973 690 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 CASP8Q14790 479 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 NWD1Q149M9 1564 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 EARS2Q5JPH6 523 aaKnown RBP14.31□□□□□ -0.12
NPHP4-203ENST00000378169 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-203ENST00000378169 PACSIN2Q9UNF0 486 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-203ENST00000378169 WDR64B1ANS9 1081 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 P4HA1P13674 534 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 HMGCS2P54868 508 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 THNSL1Q8IYQ7 743 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 CEP63Q96MT8 703 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 TMEM39BQ9GZU3 492 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 MED4Q9NPJ6 270 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 CEP72Q9P209 647 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 ATP8A1Q9Y2Q0 1164 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
NPHP4-203ENST00000378169 NR1I3Q14994 352 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF746Q6NUN9 644 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-203ENST00000378169 RAD9BQ6WBX8 426 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 CTAGE3PQ8IX95 158 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 DAAM1Q9Y4D1 1078 aa14.31□□□□□ -0.12
NPHP4-203ENST00000378169 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 ATP5DP30049 168 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 BPIFB4P59827 614 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 ORC2Q13416 577 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 B4GALNT4Q76KP1 1039 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 TYW1Q9NV66 732 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 NFRKBQ6P4R8 1299 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 SCARA5Q6ZMJ2 495 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 GSPT2Q8IYD1 628 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 SAAL1Q96ER3 474 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 FBXO28Q9NVF7 368 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 NYAP2Q9P242 653 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 GABBR1Q9UBS5 961 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 TRIM10Q9UDY6 481 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 LIMA1Q9UHB6 759 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 PPP2R5EQ16537 467 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 SWSAP1Q6NVH7 229 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 FAM71BQ8TC56 605 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 MAIP1Q8WWC4 291 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 ZNRF3Q9ULT6 936 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 HPSEQ9Y251 543 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 FAM205AQ6ZU69 1335 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 DENND3A2RUS2 1198 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF233A6NK53 670 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 RNF40O75150 1001 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 P4HBP07237 508 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 YWHAEP62258 255 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 CLUL1Q15846 466 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 PKN1Q16512 942 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 INTS8Q75QN2 995 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
NPHP4-203ENST00000378169 ZCCHC17Q9NP64 241 aaKnown RBP14.3□□□□□ -0.12
NPHP4-203ENST00000378169 SYNJ2BP-COX16A0A087WUM0 186 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 RNF8O76064 485 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 INPP5BP32019 993 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 TAOK1Q7L7X3 1001 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-203ENST00000378169 COX16Q9P0S2 106 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 ESYT3A0FGR9 886 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 SLC37A4O43826 429 aa14.29□□□□□ -0.12
NPHP4-203ENST00000378169 STAM2O75886 525 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms