RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
SSH3-203ENST00000376757 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
SSH3-203ENST00000376757 ARMCX3Q9UH62 379 aaPredicted RBP17.23■□□□□ 0.35
SSH3-203ENST00000376757 HMGB1P1B2RPK0 211 aaPredicted RBP17.22■□□□□ 0.35
SSH3-203ENST00000376757 PGRMC1O00264 195 aaKnown RBP17.22■□□□□ 0.35
SSH3-203ENST00000376757 SCNN1DP51172 638 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 USH1GQ495M9 461 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 RAPGEF5Q92565 580 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 RIOX1Q9H6W3 641 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 SLC40A1Q9NP59 571 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 MTMR4Q9NYA4 1195 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.22■□□□□ 0.35
SSH3-203ENST00000376757 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
SSH3-203ENST00000376757 LAMB1P07942 1786 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 TMEM110-MUSTN1A8MSY1 372 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 H0YGN5 161 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 PON1P27169 355 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 USP11P51784 963 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 CACNB3P54284 484 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 GPSM2P81274 684 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 MYCBPQ99417 103 aaPredicted RBP17.22■□□□□ 0.35
SSH3-203ENST00000376757 SELENOSQ9BQE4 189 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 NFS1Q9Y697 457 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 ROBO1Q9Y6N7 1651 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 GMNCA6NCL1 334 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 ZBTB39O15060 712 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 PLS1Q14651 629 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 TPCN2Q8NHX9 752 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 CYP2W1Q8TAV3 490 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 IQCDQ96DY2 449 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 KLC4Q9NSK0 619 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
SSH3-203ENST00000376757 IGSF9BQ9UPX0 1349 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 IFNAR2P48551 515 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 ZNF287Q9HBT7 754 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 LRRN2O75325 713 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 HOXD13P35453 343 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 RHBDL3P58872 404 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
SSH3-203ENST00000376757 PDIA5Q14554 519 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 COBLL1Q53SF7 1204 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 PALB2Q86YC2 1186 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 PROM2Q8N271 834 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 REEP2Q9BRK0 252 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 DDX4Q9NQI0 724 aaKnown RBP17.21■□□□□ 0.35
SSH3-203ENST00000376757 PPP1R9AQ9ULJ8 1098 aa17.21■□□□□ 0.35
SSH3-203ENST00000376757 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.34
SSH3-203ENST00000376757 CAND2O75155 1236 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 GCNT3O95395 438 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 XRCC5P13010 732 aaKnown RBP17.2■□□□□ 0.34
SSH3-203ENST00000376757 GTF2IP78347 998 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 GSTO1P78417 241 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 ARHGAP44Q17R89 818 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 MICALCLQ6ZW33 695 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 LRRC57Q8N9N7 239 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 MTFR1LQ9H019 292 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 AIPL1Q9NZN9 384 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 RNF14Q9UBS8 474 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 FOXO6A8MYZ6 492 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.34
SSH3-203ENST00000376757 CHMP2AO43633 222 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 FSBPO95073 299 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 PLTPP55058 493 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 PSMD2Q13200 908 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 COG2Q14746 738 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
SSH3-203ENST00000376757 ZC2HC1CQ53FD0 456 aaPredicted RBP17.2■□□□□ 0.34
SSH3-203ENST00000376757 CCDC91Q7Z6B0 441 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 CUL5Q93034 780 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 ZKSCAN4Q969J2 545 aaPredicted RBP17.2■□□□□ 0.34
SSH3-203ENST00000376757 SEC16BQ96JE7 1060 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 P2RX7Q99572 595 aaKnown RBP17.2■□□□□ 0.34
SSH3-203ENST00000376757 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.34
SSH3-203ENST00000376757 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 RGL1Q9NZL6 768 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 SLC12A6Q9UHW9 1150 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 SNX24Q9Y343 169 aa17.2■□□□□ 0.34
SSH3-203ENST00000376757 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 BUB1BO60566 1050 aaPredicted RBP17.19■□□□□ 0.34
SSH3-203ENST00000376757 LDHCP07864 332 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 GALCP54803 685 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 CATSPER3Q86XQ3 398 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 MREGQ8N565 214 aa17.19■□□□□ 0.34
SSH3-203ENST00000376757 TBC1D31Q96DN5 1066 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms