RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 UNC45AQ9H3U1 944 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 SAR1BQ9Y6B6 198 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 ZNF536O15090 1300 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 NOL4O94818 638 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 SEC31AO94979 1220 aaKnown RBP22.25■■□□□ 1.15
VSX1-202ENST00000376709 BMT2Q1RMZ1 405 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 SFMBT2Q5VUG0 894 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 FRMD5Q7Z6J6 570 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 MYCT1Q8N699 235 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 NFIBO00712 420 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 ZBTB39O15060 712 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 ZRANB2O95218 330 aaKnown RBP eCLIP22.25■■□□□ 1.15
VSX1-202ENST00000376709 LCA5LO95447 670 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 RPL13P26373 211 aaKnown RBP22.25■■□□□ 1.15
VSX1-202ENST00000376709 SLC9C1Q4G0N8 1177 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 CPXCR1Q8N123 301 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 PURBQ96QR8 312 aaKnown RBP22.25■■□□□ 1.15
VSX1-202ENST00000376709 NACC1Q96RE7 527 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 MXRA8Q9BRK3 442 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 BCAS3Q9H6U6 928 aa22.25■■□□□ 1.15
VSX1-202ENST00000376709 NR3C1P04150 777 aa22.24■■□□□ 1.15
VSX1-202ENST00000376709 PNMA6AP0CW24 399 aaPredicted RBP22.24■■□□□ 1.15
VSX1-202ENST00000376709 MUTP22033 750 aa22.24■■□□□ 1.15
VSX1-202ENST00000376709 NBPF12Q5TAG4 269 aaPredicted RBP22.24■■□□□ 1.15
VSX1-202ENST00000376709 CC2D1AQ6P1N0 951 aaPredicted RBP22.24■■□□□ 1.15
VSX1-202ENST00000376709 C1orf186Q6ZWK4 172 aa22.24■■□□□ 1.15
VSX1-202ENST00000376709 ASTN1O14525 1302 aa22.24■■□□□ 1.15
VSX1-202ENST00000376709 SSU72P8A0A1W2PR75 194 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 POTEB2H3BUK9 544 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 XRCC5P13010 732 aaKnown RBP22.23■■□□□ 1.15
VSX1-202ENST00000376709 PAPD7Q5XG87 772 aaKnown RBP22.23■■□□□ 1.15
VSX1-202ENST00000376709 MCF2L2Q86YR7 1114 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 SYN2Q92777 582 aaPredicted RBP22.23■■□□□ 1.15
VSX1-202ENST00000376709 KIAA1683Q9H0B3 1180 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 PARVGQ9HBI0 331 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 ARFGAP3Q9NP61 516 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 DDX39AO00148 427 aaKnown RBP22.23■■□□□ 1.15
VSX1-202ENST00000376709 ALAS1P13196 640 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 APBA1Q02410 837 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 KCNA1Q09470 495 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 EPHA7Q15375 998 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 DCAF17Q5H9S7 520 aaPredicted RBP22.23■■□□□ 1.15
VSX1-202ENST00000376709 HGSNATQ68CP4 663 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 TRIM58Q8NG06 486 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 RIT2Q99578 217 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 LXNQ9BS40 222 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 ANKZF1Q9H8Y5 726 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 HOMER2Q9NSB8 354 aa22.23■■□□□ 1.15
VSX1-202ENST00000376709 ANO9A1A5B4 782 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 CTNND1O60716 968 aaKnown RBP22.22■■□□□ 1.15
VSX1-202ENST00000376709 AKAP3O75969 853 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 SERPING1P05155 500 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 EPB41P11171 864 aaKnown RBP22.22■■□□□ 1.15
VSX1-202ENST00000376709 ITGB5P18084 799 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 GFPT1Q06210 699 aaPredicted RBP22.22■■□□□ 1.15
VSX1-202ENST00000376709 MAPK8IP2Q13387 824 aaPredicted RBP22.22■■□□□ 1.15
VSX1-202ENST00000376709 PKD2L1Q9P0L9 805 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 COL20A1Q9P218 1284 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 WRAP73Q9P2S5 460 aaPredicted RBP22.22■■□□□ 1.15
VSX1-202ENST00000376709 FRMPD4Q14CM0 1322 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 EIF3DO15371 548 aaKnown RBP eCLIP22.22■■□□□ 1.15
VSX1-202ENST00000376709 TACC1O75410 805 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 FLOT1O75955 427 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 AFPP02771 609 aaKnown RBP22.22■■□□□ 1.15
VSX1-202ENST00000376709 MAGEA1P43355 309 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 RAPGEF1Q13905 1077 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 TXLNBQ8N3L3 684 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 BANK1Q8NDB2 785 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 CLEC4DQ8WXI8 215 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 ST7Q9NRC1 585 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 KCNH7Q9NS40 1196 aa22.22■■□□□ 1.15
VSX1-202ENST00000376709 CCDC151A5D8V7 595 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 CLIC2O15247 247 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 SLC16A3O15427 465 aaKnown RBP22.21■■□□□ 1.15
VSX1-202ENST00000376709 SRGAP2O75044 1071 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 NMT1P30419 496 aaKnown RBP22.21■■□□□ 1.15
VSX1-202ENST00000376709 TCERG1LQ5VWI1 586 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 ZMYND15Q9H091 742 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 METTL14Q9HCE5 456 aaKnown RBP22.21■■□□□ 1.15
VSX1-202ENST00000376709 RAVER2Q9HCJ3 691 aaKnown RBP22.21■■□□□ 1.15
VSX1-202ENST00000376709 JADE2Q9NQC1 790 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 KCND2Q9NZV8 630 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 CTDP1Q9Y5B0 961 aaPredicted RBP22.21■■□□□ 1.15
VSX1-202ENST00000376709 RHOXF2BP0C7M4 288 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 ASTE1Q2TB18 679 aaPredicted RBP22.21■■□□□ 1.15
VSX1-202ENST00000376709 PRAMEF18Q5VWM3 479 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 RHOXF2Q9BQY4 288 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 LOXHD1Q8IVV2 1947 aa22.21■■□□□ 1.15
VSX1-202ENST00000376709 RPTORQ8N122 1335 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 TLR2O60603 784 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 BCRP11274 1271 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 ARID5AQ03989 594 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 DMTNQ08495 405 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 MTMR2Q13614 643 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 BRD3Q15059 726 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 ZC2HC1CQ53FD0 456 aaPredicted RBP22.2■■□□□ 1.14
VSX1-202ENST00000376709 B3GNT9Q6UX72 402 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 FAM178BQ8IXR5 827 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 MSANTD4Q8NCY6 345 aa22.2■■□□□ 1.14
VSX1-202ENST00000376709 IL31RAQ8NI17 732 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms