RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 STRA6Q9BX79 667 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 KCTD10Q9H3F6 313 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 ZNF408Q9H9D4 720 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 IGSF9BQ9UPX0 1349 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 PLXNA1Q9UIW2 1896 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 GNA14O95837 355 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 KRT18P05783 430 aaKnown RBP12.33□□□□□ -0.44
PDPN-202ENST00000376057 IDEP14735 1019 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 KCNJ6P48051 423 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 STX17P56962 302 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 HERC4Q5GLZ8 1057 aaPredicted RBP12.33□□□□□ -0.44
PDPN-202ENST00000376057 MIS18BP1Q6P0N0 1132 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 DRC7Q8IY82 874 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 A0A1W2PQC6 194 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 RBM47A0AV96 593 aaKnown RBP12.32□□□□□ -0.44
PDPN-202ENST00000376057 RARRES1P49788 294 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 KRT31Q15323 416 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 OTUD6AQ7L8S5 288 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
PDPN-202ENST00000376057 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 AFAP1L1Q8TED9 768 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 SCFD1Q8WVM8 642 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 C17orf75Q9HAS0 396 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 MAFBQ9Y5Q3 323 aaPredicted RBP12.32□□□□□ -0.44
PDPN-202ENST00000376057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDPN-202ENST00000376057 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 PDXKO00764 312 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
PDPN-202ENST00000376057 SSBP05455 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDPN-202ENST00000376057 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
PDPN-202ENST00000376057 RTP1P59025 263 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 SNRPFP62306 86 aaKnown RBP12.32□□□□□ -0.44
PDPN-202ENST00000376057 SPECC1LQ69YQ0 1117 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 MAMDC4Q6UXC1 1216 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 STXBP4Q6ZWJ1 553 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 LRRC8AQ8IWT6 810 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 BANK1Q8NDB2 785 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 IQCDQ96DY2 449 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 PARVGQ9HBI0 331 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
PDPN-202ENST00000376057 SUPT20HL2P0C7V6 817 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 MAPK4P31152 587 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 ABCD1P33897 745 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 COPB1P53618 953 aaKnown RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 FIZ1Q96SL8 496 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 PTPN18Q99952 460 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 NPHP3-ACAD11A0A0J9YXS1 232 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 ACTR2P61160 394 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 MAPK7Q13164 816 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 TRIM14Q14142 442 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 MYBPC2Q14324 1141 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 CCDC144BQ3MJ40 725 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 LRRC55Q6ZSA7 311 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
PDPN-202ENST00000376057 MAGEC2Q9UBF1 373 aaPredicted RBP12.31□□□□□ -0.44
PDPN-202ENST00000376057 TRIM49BA6NDI0 452 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 SLC10A3P09131 477 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 CYP2C8P10632 490 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 SP2Q02086 613 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 KNOP1Q1ED39 458 aaKnown RBP12.3□□□□□ -0.44
PDPN-202ENST00000376057 SAPCD2Q86UD0 394 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 SMCR8Q8TEV9 937 aaPredicted RBP12.3□□□□□ -0.44
PDPN-202ENST00000376057 NIFKQ9BYG3 293 aaKnown RBP12.3□□□□□ -0.44
PDPN-202ENST00000376057 MAPK8IP1Q9UQF2 711 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 DDX39AO00148 427 aaKnown RBP12.3□□□□□ -0.44
PDPN-202ENST00000376057 PPP1R37O75864 691 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 FARP2O94887 1054 aaPredicted RBP12.3□□□□□ -0.44
PDPN-202ENST00000376057 HUNKP57058 714 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 GRB14Q14449 540 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 RGMBQ6NW40 437 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 METTL7BQ6UX53 244 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 ZNF720Q7Z2F6 126 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 SFR1Q86XK3 245 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 PKNOX2Q96KN3 472 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 DRC1Q96MC2 740 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 TMX1Q9H3N1 280 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 NRBP1Q9UHY1 535 aa12.3□□□□□ -0.44
PDPN-202ENST00000376057 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms