RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 MXI1P50539 228 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 SPDYE1Q8NFV5 336 aaPredicted RBP10.55□□□□□ -0.72
SPEN-201ENST00000375759 SMYD3Q9H7B4 428 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 PDCLQ13371 301 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 ARHGAP26Q9UNA1 814 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 H0Y3Z8 333 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 MTBPQ96DY7 904 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 STAMBPL1Q96FJ0 436 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 BTG4Q9NY30 223 aa10.55□□□□□ -0.72
SPEN-201ENST00000375759 KLHL38Q2WGJ6 581 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 CAPRIN2Q6IMN6 1127 aaKnown RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPEN-201ENST00000375759 RNF169Q8NCN4 708 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 FAM149B1Q96BN6 582 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 SATB2Q9UPW6 733 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 KPNA7A9QM74 516 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 GOLGA8SH3BPF8 625 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 KIF23Q02241 960 aaPredicted RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 KRT31Q15323 416 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 RFX1P22670 979 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 BBS9Q3SYG4 887 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 STX18Q9P2W9 335 aaKnown RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 PTPRTO14522 1441 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 GRID2IPA4D2P6 1211 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 ADCK5Q3MIX3 580 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 RBM41Q96IZ5 413 aaKnown RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 KIF17Q9P2E2 1029 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 GTPBP10A4D1E9 387 aaKnown RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 TRIP13Q15645 432 aaPredicted RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 SLFN13Q68D06 897 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 MIS18BP1Q6P0N0 1132 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 NCLNQ969V3 563 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 TTC17Q96AE7 1141 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 GRAMD1AQ96CP6 724 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 ABHD10Q9NUJ1 306 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 PROM2Q8N271 834 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 OR9Q1Q8NGQ5 310 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 APOA1P02647 267 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 MAGOHP61326 146 aaKnown RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 METTL23Q86XA0 190 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 USP6NLQ92738 828 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 YIPF3Q9GZM5 350 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 NUP153P49790 1475 aaKnown RBP10.54□□□□□ -0.72
SPEN-201ENST00000375759 PLCG1P19174 1290 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 HIPK4Q8NE63 616 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 CCDC17Q96LX7 622 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 GPR108Q9NPR9 543 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 WDR17Q8IZU2 1322 aa10.54□□□□□ -0.72
SPEN-201ENST00000375759 ANO9A1A5B4 782 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 MB21D1Q8N884 522 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 TTC13Q8NBP0 860 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 SAYSD1Q9NPB0 183 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 GTF2IP78347 998 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 ALKBH5Q6P6C2 394 aaKnown RBP10.53□□□□□ -0.72
SPEN-201ENST00000375759 LRRC8BQ6P9F7 803 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 PODNQ7Z5L7 613 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 PALMO75781 387 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 COPS2P61201 443 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 ERBB4Q15303 1308 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 ABCB5Q2M3G0 1257 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 PAGE5Q96GU1 130 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 LRRC4Q9HBW1 653 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
SPEN-201ENST00000375759 BCAMP50895 628 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 RGS9BPQ6ZS82 235 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 PI4K2BQ8TCG2 481 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 NFKBIAP25963 317 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 NT5C2P49902 561 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 RESP18Q5W5W9 173 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 FAF2Q96CS3 445 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 TRIM60Q495X7 471 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 CYP26B1Q9NR63 512 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 CTIFO43310 598 aaKnown RBP10.53□□□□□ -0.72
SPEN-201ENST00000375759 HNRNPCP07910 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
SPEN-201ENST00000375759 TFAMQ00059 246 aaKnown RBP10.53□□□□□ -0.72
SPEN-201ENST00000375759 KIF22Q14807 665 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 FRA10AC1Q70Z53 315 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 ZNF496Q96IT1 587 aaPredicted RBP10.53□□□□□ -0.72
SPEN-201ENST00000375759 TGS1Q96RS0 853 aaKnown RBP10.53□□□□□ -0.72
SPEN-201ENST00000375759 PARD3BQ8TEW8 1205 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 BTBD6Q96KE9 485 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 PZPP20742 1482 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 PBRM1Q86U86 1689 aa10.53□□□□□ -0.72
SPEN-201ENST00000375759 TARSL2A2RTX5 802 aaKnown RBP10.52□□□□□ -0.72
SPEN-201ENST00000375759 CNPY4Q8N129 248 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 TBCKQ8TEA7 893 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 DACH2Q96NX9 599 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 PSMA2P25787 234 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 SCG3Q8WXD2 468 aaKnown RBP10.52□□□□□ -0.72
SPEN-201ENST00000375759 ANTXR1Q9H6X2 564 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 ECT2Q9H8V3 914 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 KLC4Q9NSK0 619 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms