RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 ARHGEF16Q5VV41 709 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 OTOP3Q7RTS5 596 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 ZBTB44Q8NCP5 570 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 PJA1Q8NG27 643 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 FTHL17Q9BXU8 183 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 TYW1Q9NV66 732 aaKnown RBP11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 IGSF9Q9P2J2 1179 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 GMEB2Q9UKD1 530 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 FBXO4Q9UKT5 387 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 CDY2AQ9Y6F7 541 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 COL4A3Q01955 1670 aa11.78□□□□□ -0.52
HLA-DRA-201ENST00000374982 RALGAPA1Q6GYQ0 2036 aa11.77□□□□□ -0.52
HLA-DRA-201ENST00000374982 LILRB5O75023 590 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 NR3C2P08235 984 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 CT47B1P0C2W7 299 aaPredicted RBP11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 UNQ6494/PRO21346Q6UXR6 183 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 TMC7Q7Z402 723 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 GPR152Q8TDT2 470 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 CLUAP1Q96AJ1 413 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 GPR20Q99678 358 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 FOXQ1Q9C009 403 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 CWH43Q9H720 699 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 MLXIPQ9HAP2 919 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 DZANK1Q9NVP4 752 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
HLA-DRA-201ENST00000374982 C2orf71A6NGG8 1288 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 LAMTOR5O43504 91 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 LAG3P18627 525 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 CSTF1Q05048 431 aaKnown RBP11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 RING1Q06587 406 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 FAM102BQ5T8I3 360 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZSCAN25Q6NSZ9 544 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 TAF2Q6P1X5 1199 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 MRPL43Q8N983 215 aaKnown RBP11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 DNAJB3Q8WWF6 145 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 BCAS3Q9H6U6 928 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 ARHGEF3Q9NR81 526 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 SPATA6Q9NWH7 488 aaPredicted RBP11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 PCDHB7Q9Y5E2 793 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 LAMA4Q16363 1823 aa11.76□□□□□ -0.53
HLA-DRA-201ENST00000374982 GCN1Q92616 2671 aaKnown RBP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 IFIT2P09913 472 aaKnown RBP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 SRFP11831 508 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 EPCAMP16422 314 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 KCNV1Q6PIU1 500 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 RSPH3Q86UC2 560 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 DDX1Q92499 740 aaKnown RBP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 GPKOWQ92917 476 aaPredicted RBP eCLIP11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 MAF1Q9H063 256 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZSCAN32Q9NX65 697 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 PADI3Q9ULW8 664 aa11.75□□□□□ -0.53
HLA-DRA-201ENST00000374982 NOP56O00567 594 aaKnown RBP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 GDF9O60383 454 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 APPP05067 770 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 MYCLP12524 364 aaPredicted RBP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 ATP5JP18859 108 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 CA8P35219 290 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 PBX3P40426 434 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 NOVP48745 357 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 MRPS6P82932 125 aaKnown RBP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 PAK2Q13177 524 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 NONOQ15233 471 aaKnown RBP eCLIP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 CLASRPQ8N2M8 674 aaKnown RBP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 SLC44A3Q8N4M1 653 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 TMEM57Q8N5G2 664 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 NELL1Q92832 810 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 OSBP2Q969R2 916 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 TMX1Q9H3N1 280 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZNF215Q9UL58 517 aaPredicted RBP11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
HLA-DRA-201ENST00000374982 SRRM3A6NNA2 597 aaPredicted RBP11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 TAF4O00268 1085 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 GPAA1O43292 621 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 ABCB7O75027 752 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 ABCB11O95342 1321 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 SLC3A2P08195 630 aaKnown RBP11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 PDHBP11177 359 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 PDE4AP27815 886 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 KRT17Q04695 432 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 PPARAQ07869 468 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms