RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 JAK3P52333 1124 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZBED6P86452 979 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MEA1Q16626 185 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 USP50Q70EL3 339 aaPredicted RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 BANK1Q8NDB2 785 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 RDM1Q8NG50 284 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZC3H15Q8WU90 426 aaKnown RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZNF592Q92610 1267 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MRPL44Q9H9J2 332 aaKnown RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PARVGQ9HBI0 331 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TYW1Q9NV66 732 aaKnown RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CYP39A1Q9NYL5 469 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CALUO43852 315 aaPredicted RBP19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NR3C2P08235 984 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MYBP10242 640 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 SFNP31947 248 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 KRT76Q01546 638 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CCDC40Q4G0X9 1142 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NSUN6Q8TEA1 469 aaKnown RBP19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 INPP4AQ96PE3 977 aaPredicted RBP19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PKD2L1Q9P0L9 805 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MYH9P35579 1960 aaKnown RBP19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ARHGEF35A5YM69 484 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZBTB39O15060 712 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CETN3O15182 167 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 STAM2O75886 525 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 QARSP47897 775 aaKnown RBP19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PPATQ06203 517 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NFIL3Q16649 462 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NLRX1Q86UT6 975 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CHST13Q8NET6 341 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 SENP7Q9BQF6 1050 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 DESI2Q9BSY9 194 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 A1CFQ9NQ94 594 aaKnown RBP19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 FAM184BQ9ULE4 1060 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 LRRC37A2A6NM11 1700 aa19.87■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CTIFO43310 598 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 KLK7P49862 253 aa19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ADAM9Q13443 819 aa19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 SYT10Q6XYQ8 523 aa19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PROCA1Q8NCQ7 364 aaPredicted RBP19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PURBQ96QR8 312 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 FIZ1Q96SL8 496 aa19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 EDEM3Q9BZQ6 932 aa19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZC3H4Q9UPT8 1303 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-201ENST00000374943 A0A0G2JLL6 359 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 WDR64B1ANS9 1081 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PRPF6O94906 941 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 GCNT3O95395 438 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NR2F2P24468 414 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CDK17Q00537 523 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TSR1Q2NL82 804 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TREML2Q5T2D2 321 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZNF746Q6NUN9 644 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 DPY19L2Q6NUT2 758 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 DLK2Q6UY11 383 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 LBX2Q6XYB7 198 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PRRT2Q7Z6L0 340 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 C4orf19Q8IY42 314 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MYCT1Q8N699 235 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZNF397Q8NF99 534 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PCMTD1Q96MG8 357 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TCEAL9Q9UHQ7 104 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ASTN1O14525 1302 aa19.85■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TESPA1A2RU30 521 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 SLC16A3O15427 465 aaKnown RBP19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ATP9AO75110 1047 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 HNRNPH3P31942 346 aaKnown RBP19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NF2P35240 595 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PPP2R3AQ06190 1150 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MAPK7Q13164 816 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 WDR59Q6PJI9 974 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 STXBP4Q6ZWJ1 553 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 FRMD5Q7Z6J6 570 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ERO1BQ86YB8 467 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ANKRD13AQ8IZ07 590 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CDCA5Q96FF9 252 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CDHR1Q96JP9 859 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TIPINQ9BVW5 301 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 L2HGDHQ9H9P8 463 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 AGPAT5Q9NUQ2 364 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 NFASCO94856 1347 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ZMYM2Q9UBW7 1377 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 CXCL11O14625 94 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 RPL13P26373 211 aaKnown RBP19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 RARRES1P49788 294 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PADI6Q6TGC4 694 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 GPBP1L1Q9HC44 474 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 SAMM50Q9Y512 469 aa19.84■□□□□ 0.77
HLA-DQB1-201ENST00000374943 SPDYE5A6NIY4 337 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CCNE2O96020 404 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 MAPTP10636 758 aaKnown RBP19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EPHX2P34913 555 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PSMC5P62195 406 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PLS1Q14651 629 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ZNF720Q7Z2F6 126 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 RIOX2Q8IUF8 465 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 DNERQ8NFT8 737 aa19.83■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CNKSR2Q8WXI2 1034 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms