RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 TUFT1Q9NNX1 390 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
HSPG2-202ENST00000374676 COL1A2P08123 1366 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 C17orf102A2RUQ5 167 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 DCDC2CA8MYV0 355 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 SPTLC2O15270 562 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 SLC26A4O43511 780 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 CAPN15O75808 1086 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 OATP04181 439 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 SPATA31C1P0DKV0 1188 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 XRCC6P12956 609 aaKnown RBP eCLIP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 INSRRP14616 1297 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 MARK3P27448 753 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 RPA1P27694 616 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 MARCKSP29966 332 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 LONP1P36776 959 aaKnown RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 KRT85P78386 507 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 FOXD4L6Q3SYB3 417 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 HAUS3Q68CZ6 603 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 FOXD4L3Q6VB84 417 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 CKAP2LQ8IYA6 745 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 LXNQ9BS40 222 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 NIFKQ9BYG3 293 aaKnown RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-202ENST00000374676 ATP11BQ9Y2G3 1177 aa12.74□□□□□ -0.37
HSPG2-202ENST00000374676 MKI67P46013 3256 aaKnown RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 MED24O75448 989 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 PRKCEQ02156 737 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 CYP4A11Q02928 519 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 CTTNQ14247 550 aaKnown RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 GRIK4Q16099 956 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 GDF6Q6KF10 455 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 TPH2Q8IWU9 490 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 KRI1Q8N9T8 703 aaKnown RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 MMTAG2Q9BU76 263 aaKnown RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 WRAP73Q9P2S5 460 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-202ENST00000374676 TRPC6Q9Y210 931 aa12.73□□□□□ -0.37
HSPG2-202ENST00000374676 LOXHD1Q8IVV2 1947 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 MBLAC1A4D2B0 266 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-202ENST00000374676 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 ZBTB42B2RXF5 422 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 B4GALT4O60513 344 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
HSPG2-202ENST00000374676 GRIN1Q05586 938 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 HIC1Q14526 733 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
HSPG2-202ENST00000374676 PTGISQ16647 500 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 HYIQ5T013 277 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 MARCH8Q5T0T0 291 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 ANO5Q75V66 913 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 OTUD6AQ7L8S5 288 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
HSPG2-202ENST00000374676 SNX29Q8TEQ0 813 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 PPP1R13LQ8WUF5 828 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 LMBR1Q8WVP7 490 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 DPF3Q92784 378 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 CTAGE1Q96RT6 745 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-202ENST00000374676 ANKEF1Q9NU02 776 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
HSPG2-202ENST00000374676 PPME1Q9Y570 386 aa12.72□□□□□ -0.37
HSPG2-202ENST00000374676 TNRC18O15417 2968 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-202ENST00000374676 PP2D1A8MPX8 630 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 MAGEB2O15479 319 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 TREHO43280 583 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 EVI5O60447 810 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 CUTAO60888 179 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 CLTBP09497 229 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 CDC25AP30304 524 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 YWHABP31946 246 aaKnown RBP12.71□□□□□ -0.37
HSPG2-202ENST00000374676 UBA7P41226 1012 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-202ENST00000374676 PTK7Q13308 1070 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 AXDND1Q5T1B0 1012 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-202ENST00000374676 SERINC5Q86VE9 423 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-202ENST00000374676 CLIC6Q96NY7 704 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 CEP89Q96ST8 783 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 NT5C3AQ9H0P0 336 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 NOD1Q9Y239 953 aa12.71□□□□□ -0.37
HSPG2-202ENST00000374676 KDM3AQ9Y4C1 1321 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms