RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NAALADL2Q58DX5 795 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 CDKAL1Q5VV42 579 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 WDR11Q9BZH6 1224 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 BCAS3Q9H6U6 928 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 KIAA1217Q5T5P2 1943 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
HMGA1-203ENST00000374116 ARIH2O95376 493 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 FOSP01100 380 aaPredicted RBP15.84■□□□□ 0.13
HMGA1-203ENST00000374116 MYL1P05976 194 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 ITGB5P18084 799 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 CCND2P30279 289 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 SREBF1P36956 1147 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 STAT6P42226 847 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 SEMA3FQ13275 785 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 KLHL10Q6JEL2 608 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 TAPT1Q6NXT6 567 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 MORC4Q8TE76 937 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 AK8Q96MA6 479 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 IWS1Q96ST2 819 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 ST7Q9NRC1 585 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 DISC1Q9NRI5 854 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 V9GYY5 206 aaPredicted RBP15.84■□□□□ 0.13
HMGA1-203ENST00000374116 FAM86B1E9PN63 330 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 FAM86B2P0C5J1 330 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 OR52Z1P0C646 297 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 CDC25AP30304 524 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 MAP3K21Q5TCX8 1036 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 ZNF658Q5TYW1 1059 aaPredicted RBP15.84■□□□□ 0.13
HMGA1-203ENST00000374116 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 TEX2Q8IWB9 1127 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 STAMQ92783 540 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 COPS5Q92905 334 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 GJA10Q969M2 543 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 ZNF333Q96JL9 665 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 MTMR9Q96QG7 549 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 RNF208Q9H0X6 261 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 BLZF1Q9H2G9 400 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 ABHD16BQ9H3Z7 469 aa15.84■□□□□ 0.13
HMGA1-203ENST00000374116 DOCK5Q9H7D0 1870 aa15.83■□□□□ 0.13
HMGA1-203ENST00000374116 ARHGAP6O43182 974 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 CCNT1O60563 726 aaKnown RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 TDP2O95551 362 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 RPN1P04843 607 aaKnown RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 CCL5P13501 91 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 ZNF76P36508 570 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 UBA7P41226 1012 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 CLCN6P51797 869 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 KARSQ15046 597 aaKnown RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 LY6KQ17RY6 165 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 RRAGBQ5VZM2 374 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 APTXQ7Z2E3 356 aaKnown RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 MSL3Q8N5Y2 521 aaKnown RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 CRYGNQ8WXF5 182 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 MAF1Q9H063 256 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 RASSF4Q9H2L5 321 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 ARGLU1Q9NWB6 273 aaPredicted RBP15.83■□□□□ 0.12
HMGA1-203ENST00000374116 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
HMGA1-203ENST00000374116 STX10O60499 249 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
HMGA1-203ENST00000374116 STX17P56962 302 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 FILIP1LQ4L180 1135 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 TMEM139Q8IV31 216 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 LRRC15Q8TF66 581 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 MPHOSPH6Q99547 160 aaKnown RBP15.82■□□□□ 0.12
HMGA1-203ENST00000374116 CUEDC2Q9H467 287 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 MAGEF1Q9HAY2 307 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 HMX1Q9NP08 348 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-203ENST00000374116 GEMIN8Q9NWZ8 242 aaKnown RBP15.82■□□□□ 0.12
HMGA1-203ENST00000374116 CTNND2Q9UQB3 1225 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 DNAH12Q6ZR08 3092 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 PP2D1A8MPX8 630 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 ZSCAN12O43309 604 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 ARP10275 920 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 SMPD1P17405 629 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 SP2Q02086 613 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 PRR16Q569H4 304 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 SMYD4Q8IYR2 804 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-203ENST00000374116 IGSF22Q8N9C0 903 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 BAG1Q99933 345 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-203ENST00000374116 EHMT1Q9H9B1 1298 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 KBTBD4Q9NVX7 518 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 PSD3Q9NYI0 1048 aa15.82■□□□□ 0.12
HMGA1-203ENST00000374116 B4DLN1 442 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 ATP9AO75110 1047 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 NOP2P46087 812 aaKnown RBP15.81■□□□□ 0.12
HMGA1-203ENST00000374116 PAK1Q13153 545 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 KCNB1Q14721 858 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 PPP4R3AQ6IN85 833 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 TC2NQ8N9U0 490 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 RASSF8Q8NHQ8 419 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 ARMC5Q96C12 935 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 DEFB118Q96PH6 123 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 MXRA8Q9BRK3 442 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.81■□□□□ 0.121e-13■■■■■ 41.5
HMGA1-203ENST00000374116 VTA1Q9NP79 307 aa15.81■□□□□ 0.12
HMGA1-203ENST00000374116 TELO2Q9Y4R8 837 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms