RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FAM83BQ5T0W9 1011 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 NCAPH2Q6IBW4 605 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 CCDC70Q6NSX1 233 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 DYMQ7RTS9 669 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 CACNA2D4Q7Z3S7 1137 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 USP37Q86T82 979 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 NLRX1Q86UT6 975 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 VPS36Q86VN1 386 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 CLEC10AQ8IUN9 316 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 HNRNPLLQ8WVV9 542 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 ALS2CR12Q96Q35 445 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 ZNF577Q9BSK1 485 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 KCTD10Q9H3F6 313 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PARVGQ9HBI0 331 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 HOXC10Q9NYD6 342 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 AIPL1Q9NZN9 384 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 OGFRQ9NZT2 677 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 TBC1D7Q9P0N9 293 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 ARMCX3Q9UH62 379 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PPP1R9AQ9ULJ8 1098 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 MAPK8IP1Q9UQF2 711 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 SIK3Q9Y2K2 1263 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 PPME1Q9Y570 386 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 FER1L6Q2WGJ9 1857 aa9.61□□□□□ -0.87
SNRNP40-202ENST00000373720 TRIM49BA6NDI0 452 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 UNCXA6NJT0 531 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 BTNL10A8MVZ5 291 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 POTECB2RU33 542 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 RBAK-RBAKDNI3L0D1 243 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 IPO5O00410 1097 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 OPLAHO14841 1288 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 PJA2O43164 708 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 N4BP1O75113 896 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 MED24O75448 989 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 ERLIN1O75477 346 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 SLITRK3O94933 977 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 SERPING1P05155 500 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 EPB41P11171 864 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 VAV2P52735 878 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 PMS1P54277 932 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 BRD3Q15059 726 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 CLUL1Q15846 466 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 USH1GQ495M9 461 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 HSP90AA4PQ58FG1 418 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 RAD9BQ6WBX8 426 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 SRGAP1Q7Z6B7 1085 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 C12orf56Q8IXR9 622 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 SMAP1Q8IYB5 467 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 SCYL3Q8IZE3 742 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 CPLX3Q8WVH0 158 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 GPRASP2Q96D09 838 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 DRC1Q96MC2 740 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 TEPSINQ96N21 525 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 PLIN2Q99541 437 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 MPHOSPH6Q99547 160 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 NHEJ1Q9H9Q4 299 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 JADE2Q9NQC1 790 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 ANKEF1Q9NU02 776 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 INTUQ9ULD6 942 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 CCPG1Q9ULG6 757 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 JRKLQ9Y4A0 524 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 UBIAD1Q9Y5Z9 338 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 MYH7BA7E2Y1 1941 aa9.6□□□□□ -0.87
SNRNP40-202ENST00000373720 CLRN2A0PK11 232 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 CCDC151A5D8V7 595 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 SOWAHDA6NJG2 315 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 E9PMD0 336 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 KIAA0391O15091 583 aaKnown RBP9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 TACC1O75410 805 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 CLSTN1O94985 981 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 FAM13AO94988 1023 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 SSBP05455 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 PSMC2P35998 433 aaKnown RBP9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 ECE1P42892 770 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 BACE1P56817 501 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 RTP1P59025 263 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 GPS2Q13227 327 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 ARSHQ5FYA8 562 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 PAPD7Q5XG87 772 aaKnown RBP9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 ZNF746Q6NUN9 644 aaPredicted RBP9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 RINT1Q6NUQ1 792 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 C1orf186Q6ZWK4 172 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 OTUD6AQ7L8S5 288 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 C4orf19Q8IY42 314 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 GPC2Q8N158 579 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 ACER1Q8TDN7 264 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 LRRC15Q8TF66 581 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 TMEM39BQ9GZU3 492 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 DEF6Q9H4E7 631 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 FBXO40Q9UH90 709 aa9.59□□□□□ -0.87
SNRNP40-202ENST00000373720 ADAMTS5Q9UNA0 930 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms