RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-201ENST00000373554 NOL7Q9UMY1 257 aaKnown RBP13.54□□□□□ -0.24
HDAC8-201ENST00000373554 CEP131Q9UPN4 1083 aa13.54□□□□□ -0.24
HDAC8-201ENST00000373554 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 OATP04181 439 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 CTSHP09668 335 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 RSPH10BP0C881 870 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 ATP2B1P20020 1258 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 PRKCEQ02156 737 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 ORC2Q13416 577 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-201ENST00000373554 CALCRLQ16602 461 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 ZNF484Q5JVG2 852 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 MARCH8Q5T0T0 291 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 OTOP2Q7RTS6 562 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 TRMT1LQ7Z2T5 733 aaKnown RBP13.53□□□□□ -0.24
HDAC8-201ENST00000373554 TRAPPC12Q8WVT3 735 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 HERVK_113Q902F9 699 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 HAS1Q92839 578 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
HDAC8-201ENST00000373554 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 KIF28PB7ZC32 967 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-201ENST00000373554 SOX1O00570 391 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-201ENST00000373554 DKC1O60832 514 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC8-201ENST00000373554 ATP4AP20648 1035 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC8-201ENST00000373554 MCM7P33993 719 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 CUL4AQ13619 759 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 UGCGQ16739 394 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 TTC38Q5R3I4 469 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 MCTP1Q6DN14 999 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 TRAF7Q6Q0C0 670 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 DNAJB3Q8WWF6 145 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 FAM49AQ9H0Q0 323 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-201ENST00000373554 NRBP2Q9NSY0 501 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 PCDHA12Q9UN75 941 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.25
HDAC8-201ENST00000373554 SCN5AQ14524 2016 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 KAT6AQ92794 2004 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-201ENST00000373554 M0QZ92 97 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 WNT7AO00755 349 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 ZNF862O60290 1169 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 NBNO60934 754 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 CXCL10P02778 98 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 KLRC1P26715 233 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 PSMC5P62195 406 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 SMAD3P84022 425 aaKnown RBP13.51□□□□□ -0.25
HDAC8-201ENST00000373554 RASIP1Q5U651 963 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 CNKSR3Q6P9H4 555 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 MTHFD1LQ6UB35 978 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 VWCEQ96DN2 955 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 ZBTB10Q96DT7 871 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 LRCH3Q96II8 777 aa13.51□□□□□ -0.25
HDAC8-201ENST00000373554 TTC12Q9H892 705 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-201ENST00000373554 SEPT9Q9UHD8 586 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-201ENST00000373554 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-201ENST00000373554 SMIM35A0A1B0GVV1 85 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-201ENST00000373554 EML1O00423 815 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 PDCP20941 246 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 TXKP42681 527 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 QARSP47897 775 aaKnown RBP13.5□□□□□ -0.25
HDAC8-201ENST00000373554 MBTPS1Q14703 1052 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 EPHA7Q15375 998 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 XKR3Q5GH77 459 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 FAM26DQ5JW98 314 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 IER5Q5VY09 327 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
HDAC8-201ENST00000373554 GPR153Q6NV75 609 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 BANK1Q8NDB2 785 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 CXXC1Q9P0U4 656 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-201ENST00000373554 SLC4A7Q9Y6M7 1214 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 MYH9P35579 1960 aaKnown RBP13.5□□□□□ -0.25
HDAC8-201ENST00000373554 LAMA3Q16787 3333 aa13.5□□□□□ -0.25
HDAC8-201ENST00000373554 ZBTB42B2RXF5 422 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 MAGEB2O15479 319 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 EFCAB14O75071 495 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 C22orf31O95567 290 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 P4HBP07237 508 aaKnown RBP13.49□□□□□ -0.25
HDAC8-201ENST00000373554 OR52Z1P0C646 297 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 KCNJ6P48051 423 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
HDAC8-201ENST00000373554 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 GPNMBQ14956 572 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 ZNF174Q15697 407 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 NME8Q8N427 588 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 SNX21Q969T3 373 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 INTS4Q96HW7 963 aaKnown RBP13.49□□□□□ -0.25
HDAC8-201ENST00000373554 LXNQ9BS40 222 aa13.49□□□□□ -0.25
HDAC8-201ENST00000373554 CDY2AQ9Y6F7 541 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms