RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SLC12A7Q9Y666 1083 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 DOCK2Q92608 1830 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
ATG4A-203ENST00000372232 LAMB2P55268 1798 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 C5orf60A6NFR6 353 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 VIL1P09327 827 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 PARP1P09874 1014 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 CYP7A1P22680 504 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 MDH1P40925 334 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SEC24CP53992 1094 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 MRPS35P82673 323 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 GUCY1A3Q02108 690 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 MTF1Q14872 753 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 STK38Q15208 465 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 ENOX2Q16206 610 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 NCAPH2Q6IBW4 605 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 HIBCHQ6NVY1 386 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 BICDL1Q6ZP65 573 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 AGAP11Q8TF27 550 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 LZICQ8WZA0 190 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 CCT6BQ92526 530 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 PHKBQ93100 1093 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 PANX2Q96RD6 677 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SDF4Q9BRK5 362 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 NAA15Q9BXJ9 866 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 GOLGA8AA7E2F4 631 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SPTLC2O15270 562 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 RANBP6O60518 1105 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 CCND1P24385 295 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 KIF5BP33176 963 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 MYL5Q02045 173 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 ZNF268Q14587 947 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 KIAA0753Q2KHM9 967 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SLC4A8Q2Y0W8 1093 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 RC3H1Q5TC82 1133 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 ANO1Q5XXA6 986 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 KRT40Q6A162 431 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SMIM5Q71RC9 77 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 RASGRP2Q7LDG7 609 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 TRAPPC11Q7Z392 1133 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 GSPT2Q8IYD1 628 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 RNF168Q8IYW5 571 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 C1orf131Q8NDD1 294 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SMCR8Q8TEV9 937 aaPredicted RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 ATRIPQ8WXE1 791 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 CELF1Q92879 486 aaKnown RBP9.67□□□□□ -0.86
ATG4A-203ENST00000372232 TEKT1Q969V4 418 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 OPTNQ96CV9 577 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 HVCN1Q96D96 273 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 FAM81BQ96LP2 452 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 MYL10Q9BUA6 226 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 NARFQ9UHQ1 456 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SYNPO2Q9UMS6 1093 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 ZNF831Q5JPB2 1677 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 SYNRGQ9UMZ2 1314 aa9.67□□□□□ -0.86
ATG4A-203ENST00000372232 BCORQ6W2J9 1755 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 CFAP73A6NFT4 308 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 GSTA1P08263 222 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 YY1P25490 414 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 NDUFA8P51970 172 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 ADKP55263 362 aaKnown RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 APBA1Q02410 837 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 NNTQ13423 1086 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 ADAM9Q13443 819 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 CUL4BQ13620 913 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 BTG3Q14201 252 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 CMPK2Q5EBM0 449 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 SPECC1LQ69YQ0 1117 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 GALNT17Q6IS24 598 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 RAD9BQ6WBX8 426 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 MAATS1Q7Z4T9 603 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 ZBTB33Q86T24 672 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 JAKMIP2Q96AA8 810 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 PREBQ9HCU5 417 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 TUBGCP4Q9UGJ1 667 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 TTF2Q9UNY4 1162 aaKnown RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 BZW2Q9Y6E2 419 aaKnown RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 C4AP0C0L4 1744 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 C4BP0C0L5 1744 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 PNMA6FA0A0J9YX94 578 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 A0A0U1RQJ8 604 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 E7EVH7 732 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 PPARAQ07869 468 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 BYSLQ13895 437 aaKnown RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 PPP1R7Q15435 360 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 PKN1Q16512 942 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 ATCAYQ86WG3 371 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 VPS37DQ86XT2 251 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 ELOA2Q8IYF1 753 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms