RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 A6NJR5 290 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 RWDD2BP57060 319 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 ANTXR2P58335 489 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 CCDC38Q502W7 563 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 RNF207Q6ZRF8 634 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 PHLDB2Q86SQ0 1253 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 PIGOQ8TEQ8 1089 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 ZNF341Q9BYN7 854 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 LIMA1Q9UHB6 759 aaKnown RBP12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 ANAPC5Q9UJX4 755 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 PODXLO00592 558 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 RXRBP28702 533 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 CACNB3P54284 484 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 PEX3P56589 373 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 NFIXQ14938 502 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 TDRD3Q9H7E2 651 aaKnown RBP12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 FEM1BQ9UK73 627 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 WDR64B1ANS9 1081 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 INHBAP08476 426 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 TFAMQ00059 246 aaKnown RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 DR1Q01658 176 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 CAPN12Q6ZSI9 719 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 ARHGEF18Q6ZSZ5 1173 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 MED10Q9BTT4 135 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 NCOA3Q9Y6Q9 1424 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 A0A1B0GTH6 734 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 POTECB2RU33 542 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 SGK1O00141 431 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 IGBP1P78318 339 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 KRT76Q01546 638 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 TRIM9Q9C026 710 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 CAPN11Q9UMQ6 739 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 KIDINS220Q9ULH0 1771 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 SART1O43290 800 aaKnown RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 CTNND1O60716 968 aaKnown RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 PPM1FP49593 454 aaPredicted RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 YWHAGP61981 247 aaKnown RBP eCLIP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 MAP3K21Q5TCX8 1036 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 ADGRF4Q8IZF3 695 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 STAG2Q8N3U4 1231 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 TMEM260Q9NX78 707 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 SCINQ9Y6U3 715 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 ABCB11O95342 1321 aa12.8□□□□□ -0.36
DEPDC1-201ENST00000370966 USP27XA6NNY8 438 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 SFI1A8K8P3 1242 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 PP2D1A8MPX8 630 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 POC1B-GALNT4F8VUJ3 575 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 KCNQ2O43526 872 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 PALMO75781 387 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 NR1D1P20393 614 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 SLC8A1P32418 973 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 IFNAR2P48551 515 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 CLNS1AP54105 237 aaKnown RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 PADI6Q6TGC4 694 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 VCXQ9H320 206 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 CHGBP05060 677 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 FDX1P10109 184 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 TPD52P55327 224 aaPredicted RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 MTMR1Q13613 665 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 TTBK2Q6IQ55 1244 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 ELOA2Q8IYF1 753 aaPredicted RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 NEURL4Q96JN8 1562 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 MAP3K14Q99558 947 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 HERC5Q9UII4 1024 aaKnown RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 RASGRF2O14827 1237 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 MCF2LO15068 1137 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 NOL3O60936 208 aaKnown RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 TDP2O95551 362 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 FGGP02679 453 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 OSBPP22059 807 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 GPSM2P81274 684 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 RNASELQ05823 741 aaKnown RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 TERF2Q15554 542 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 PALM3A6NDB9 673 aaPredicted RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 EVI5O60447 810 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 RFX1P22670 979 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 SLC7A5Q01650 507 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 IFT88Q13099 833 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 RFX6Q8HWS3 928 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 PPP1R12CQ9BZL4 782 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 NFU1Q9UMS0 254 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 RRP15Q9Y3B9 282 aaKnown RBP12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
DEPDC1-201ENST00000370966 KRT1P04264 644 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms