RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 KCNB2Q92953 911 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
LMO4-201ENST00000370542 ZNF215Q9UL58 517 aaPredicted RBP16.87■□□□□ 0.29
LMO4-201ENST00000370542 CNTNAP5Q8WYK1 1306 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 CFAP54Q96N23 3096 aa16.87■□□□□ 0.29
LMO4-201ENST00000370542 GSTTP1A0A1W2PQM5 241 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 GTPBP6O43824 516 aaPredicted RBP16.86■□□□□ 0.29
LMO4-201ENST00000370542 ERVK-21P61565 698 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 GRB10Q13322 594 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 TMCO2Q7Z6W1 182 aaPredicted RBP16.86■□□□□ 0.29
LMO4-201ENST00000370542 TRIM50Q86XT4 487 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
LMO4-201ENST00000370542 ARNTL2Q8WYA1 636 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 ANKRD7Q92527 254 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 UIMC1Q96RL1 719 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 JADE2Q9NQC1 790 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 FAM217BQ9NTX9 383 aaPredicted RBP16.86■□□□□ 0.29
LMO4-201ENST00000370542 SETD4Q9NVD3 440 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 PCDHA6Q9UN73 950 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 PCDHA8Q9Y5H6 950 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 NRCAMQ92823 1304 aa16.86■□□□□ 0.29
LMO4-201ENST00000370542 hCG_1642624A0A1W2PR95 340 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
LMO4-201ENST00000370542 CTIFO43310 598 aaKnown RBP16.85■□□□□ 0.29
LMO4-201ENST00000370542 TCF7P36402 384 aaPredicted RBP16.85■□□□□ 0.29
LMO4-201ENST00000370542 GABPB1Q06547 395 aaPredicted RBP16.85■□□□□ 0.29
LMO4-201ENST00000370542 UBE2SQ16763 222 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 TYW1BQ6NUM6 668 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 PPP1R18Q6NYC8 613 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.85■□□□□ 0.29
LMO4-201ENST00000370542 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 LMBR1Q8WVP7 490 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 OSBPL7Q9BZF2 842 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 RIC8AQ9NPQ8 531 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 KAT6AQ92794 2004 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 COL4A6Q14031 1691 aa16.85■□□□□ 0.29
LMO4-201ENST00000370542 BRWD1Q9NSI6 2320 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 LINC01553A4QN01 128 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 hCG_1984214I3L0E3 225 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
LMO4-201ENST00000370542 ALADP13716 330 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 KRT32Q14532 448 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 KRT40Q6A162 431 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 WWC2Q6AWC2 1192 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 SYNE3Q6ZMZ3 975 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 GJD3Q8N144 294 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 FBXL16Q8N461 479 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 CCDC82Q8N4S0 544 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 ZNF713Q8N859 430 aaPredicted RBP16.84■□□□□ 0.29
LMO4-201ENST00000370542 KIAA1524Q8TCG1 905 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 TOP1MTQ969P6 601 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 OGFRQ9NZT2 677 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 INSL6Q9Y581 213 aa16.84■□□□□ 0.29
LMO4-201ENST00000370542 RBAK-RBAKDNI3L0D1 243 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 FOSP01100 380 aaPredicted RBP16.83■□□□□ 0.28
LMO4-201ENST00000370542 CLK2P49760 499 aaKnown RBP16.83■□□□□ 0.28
LMO4-201ENST00000370542 MTMR1Q13613 665 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 TAF2Q6P1X5 1199 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 HEATR3Q7Z4Q2 680 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
LMO4-201ENST00000370542 FAM178BQ8IXR5 827 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 ZNF710Q8N1W2 664 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.28
LMO4-201ENST00000370542 TGS1Q96RS0 853 aaKnown RBP16.83■□□□□ 0.28
LMO4-201ENST00000370542 PHOX2BQ99453 314 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 MXRA8Q9BRK3 442 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 EHMT1Q9H9B1 1298 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 SUGCTQ9HAC7 445 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 ERAP1Q9NZ08 941 aa16.83■□□□□ 0.28
LMO4-201ENST00000370542 SIP14410 1827 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 NFASCO94856 1347 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.82■□□□□ 0.28
LMO4-201ENST00000370542 STXBP3O00186 592 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 ZBTB43O43298 467 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 CAVIN2O95810 425 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 CHRNA1P02708 482 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 AMHP03971 560 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 HMGB1P09429 215 aaKnown RBP16.82■□□□□ 0.28
LMO4-201ENST00000370542 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 MGAT3Q09327 533 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 RTN1Q16799 776 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 MARCH8Q5T0T0 291 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 SEPT8Q92599 483 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 APBB2Q92870 758 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 PCYT2Q99447 389 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 SMARCAD1Q9H4L7 1026 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 KCNH7Q9NS40 1196 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 BARHL2Q9NY43 387 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 CGNQ9P2M7 1197 aaKnown RBP16.82■□□□□ 0.28
LMO4-201ENST00000370542 PAXBP1Q9Y5B6 917 aa16.82■□□□□ 0.28
LMO4-201ENST00000370542 COL4A4P53420 1690 aaPredicted RBP16.81■□□□□ 0.28
LMO4-201ENST00000370542 NID2Q14112 1375 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 ATG7O95352 703 aa16.81■□□□□ 0.28
LMO4-201ENST00000370542 CDC27P30260 824 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms