RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 SDCCAG3Q96C92 435 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 TRIM11Q96F44 468 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 DHTKD1Q96HY7 919 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 MRPL46Q9H2W6 279 aaKnown RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SYNDIG1Q9H7V2 258 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ZNF302Q9NR11 478 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 CLDN3O15551 220 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 CIITAP33076 1130 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 MSH2P43246 934 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 FBXW4P57775 412 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 YWHAHQ04917 246 aaPredicted RBP9.21□□□□□ -0.93
ABCA4-201ENST00000370225 MFSD14CQ5VZR4 134 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 ERICH1Q86X53 443 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 ACRBPQ8NEB7 543 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 TCP11Q8WWU5 503 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 FAM213AQ9BRX8 229 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 CUEDC2Q9H467 287 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 FEM1BQ9UK73 627 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.21□□□□□ -0.93
ABCA4-201ENST00000370225 PRPF3O43395 683 aaKnown RBP9.21□□□□□ -0.93
ABCA4-201ENST00000370225 KIF23Q02241 960 aaPredicted RBP9.21□□□□□ -0.93
ABCA4-201ENST00000370225 CYP27A1Q02318 531 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 ZBTB41Q5SVQ8 909 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 HVCN1Q96D96 273 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 ADGRL3Q9HAR2 1447 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 SMIM24O75264 130 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 UPP2O95045 317 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 ATICP31939 592 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 STAT3P40763 770 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 NME3Q13232 169 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 MAN2A1Q16706 1144 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 TLK1Q9UKI8 766 aa9.21□□□□□ -0.93
ABCA4-201ENST00000370225 MX2P20592 715 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 TRAPPC10P48553 1259 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 RASSF2P50749 326 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 PRAMEF18Q5VWM3 479 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 FAM117BQ6P1L5 589 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 EFCAB13Q8IY85 973 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 BBOF1Q8ND07 529 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 DCAF4Q8WV16 495 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 DYDC2Q96IM9 177 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 EPB41L5Q9HCM4 733 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 ATP7BP35670 1465 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 ARHGEF37A1IGU5 675 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 PIK3R2O00459 728 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 FCER1AP12319 257 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 HOXD10P28358 340 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 STX1BP61266 288 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 PCGF5Q86SE9 256 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 PAGE5Q96GU1 130 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 CD209Q9NNX6 404 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 SARS2Q9NP81 518 aaKnown RBP9.21□□□□□ -0.94
ABCA4-201ENST00000370225 PRR36Q9H6K5 1346 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 SLMAPQ14BN4 828 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 APOBEC3FQ8IUX4 373 aaKnown RBP9.21□□□□□ -0.94
ABCA4-201ENST00000370225 CEP95Q96GE4 821 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 NUDCD1Q96RS6 583 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 NHEJ1Q9H9Q4 299 aaPredicted RBP9.21□□□□□ -0.94
ABCA4-201ENST00000370225 MRPL47Q9HD33 250 aaKnown RBP9.21□□□□□ -0.94
ABCA4-201ENST00000370225 RNF146Q9NTX7 359 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 ITM2BQ9Y287 266 aa9.21□□□□□ -0.94
ABCA4-201ENST00000370225 ECEL1O95672 775 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 ADORA2BP29275 332 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 RECQLP46063 649 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 TSPY1Q01534 308 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 ZNF699Q32M78 642 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 PSPC1Q8WXF1 523 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 SART1O43290 800 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 MOCS2O96007 188 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 TCP1P17987 556 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 CASP1P29466 404 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 GPC3P51654 580 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 MRPS25P82663 173 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 LMNB2Q03252 620 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 TTLL4Q14679 1199 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 PPP1R13BQ96KQ4 1090 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 GSDMAQ96QA5 445 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 RPAP3Q9H6T3 665 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 LARGE1O95461 756 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 PLS3P13797 630 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 TCP11X2Q5H9J9 407 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 ZNF667Q5HYK9 610 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 FRA10AC1Q70Z53 315 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 TRPC7Q9HCX4 862 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 GABBR1Q9UBS5 961 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 BCAP29Q9UHQ4 241 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 EIF3CLB5ME19 914 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 HUS1O60921 280 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 ZBED1O96006 694 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 ZNF853P0CG23 659 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 JAK3P52333 1124 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 SLC7A5Q01650 507 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 IFT43Q96FT9 208 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 EIF3CQ99613 913 aaKnown RBP9.2□□□□□ -0.94
ABCA4-201ENST00000370225 NARFQ9UHQ1 456 aa9.2□□□□□ -0.94
ABCA4-201ENST00000370225 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 289.9 ms