RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ERVFC1P60507 584 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 PTH1RQ03431 593 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 PAK2Q13177 524 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 UBE2SQ16763 222 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 GIMAP8Q8ND71 665 aaPredicted RBP17.69■□□□□ 0.42
SSR4-204ENST00000370087 PRRX2Q99811 253 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 FTHL17Q9BXU8 183 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 SMARCAD1Q9H4L7 1026 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 CDH22Q9UJ99 828 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
SSR4-204ENST00000370087 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 SP100P23497 879 aaPredicted RBP17.68■□□□□ 0.42
SSR4-204ENST00000370087 PKN1Q16512 942 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 PTPN21Q16825 1174 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 DUSP6Q16828 381 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 IER5Q5VY09 327 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 CUL5Q93034 780 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 APOL5Q9BWW9 433 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 SPZ1Q9BXG8 430 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 SQORQ9Y6N5 450 aa17.68■□□□□ 0.42
SSR4-204ENST00000370087 ZFHX2Q9C0A1 2572 aaPredicted RBP17.68■□□□□ 0.42
SSR4-204ENST00000370087 DCHS1Q96JQ0 3298 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 STAG3L1P0CL83 205 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 AVPR2P30518 371 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 APOBRQ0VD83 1088 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 TRDNQ13061 729 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 MTMR1Q13613 665 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 KCNC3Q14003 757 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 PLCB4Q15147 1175 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 FAM102BQ5T8I3 360 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
SSR4-204ENST00000370087 IGDCC4Q8TDY8 1250 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 CELF4Q9BZC1 486 aaKnown RBP17.67■□□□□ 0.42
SSR4-204ENST00000370087 S1PR5Q9H228 398 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 ERVK-5Q9HDB9 667 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 TLR9Q9NR96 1032 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 TRPC6Q9Y210 931 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 PCDHA2Q9Y5H9 948 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 CACNA1HO95180 2353 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 EVPLQ92817 2033 aa17.67■□□□□ 0.42
SSR4-204ENST00000370087 RRN3P2A6NIE6 340 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 E7EWF7 191 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 FSCN2O14926 492 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 FGF18O76093 207 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 ATF7P17544 494 aaPredicted RBP17.66■□□□□ 0.42
SSR4-204ENST00000370087 SARSP49591 514 aaKnown RBP17.66■□□□□ 0.42
SSR4-204ENST00000370087 COL9A3Q14050 684 aaPredicted RBP17.66■□□□□ 0.42
SSR4-204ENST00000370087 ZNF654Q8IZM8 581 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 TMEM40Q8WWA1 233 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 RRP36Q96EU6 259 aaKnown RBP17.66■□□□□ 0.42
SSR4-204ENST00000370087 CDHR1Q96JP9 859 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 CDHR5Q9HBB8 845 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 JADE2Q9NQC1 790 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 LRFN2Q9ULH4 789 aa17.66■□□□□ 0.42
SSR4-204ENST00000370087 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 ERICH2A1L162 156 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 TBKBP1A7MCY6 615 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 H0Y858 1186 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
SSR4-204ENST00000370087 PLPP4Q5VZY2 271 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 SYCE2Q6PIF2 218 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
SSR4-204ENST00000370087 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
SSR4-204ENST00000370087 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 MICAL1Q8TDZ2 1067 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 ATOH1Q92858 354 aaPredicted RBP17.65■□□□□ 0.42
SSR4-204ENST00000370087 NEK1Q96PY6 1258 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 SMOC2Q9H3U7 446 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 LY9Q9HBG7 655 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 JPH1Q9HDC5 661 aaPredicted RBP17.65■□□□□ 0.42
SSR4-204ENST00000370087 NOC2LQ9Y3T9 749 aaKnown RBP17.65■□□□□ 0.42
SSR4-204ENST00000370087 KDM3AQ9Y4C1 1321 aa17.65■□□□□ 0.42
SSR4-204ENST00000370087 M0QZ92 97 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 KRT76Q01546 638 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 UBE3AQ05086 875 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 NFX1Q12986 1120 aaKnown RBP17.64■□□□□ 0.41
SSR4-204ENST00000370087 SPOUT1Q5T280 376 aaKnown RBP17.64■□□□□ 0.41
SSR4-204ENST00000370087 LLGL2Q6P1M3 1020 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 MTHFD1LQ6UB35 978 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 RALYLQ86SE5 291 aaKnown RBP17.64■□□□□ 0.41
SSR4-204ENST00000370087 CYP2W1Q8TAV3 490 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 CWH43Q9H720 699 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 PSTPIP2Q9H939 334 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 PCDHB12Q9Y5F1 795 aa17.64■□□□□ 0.41
SSR4-204ENST00000370087 HIDE1A8MVS5 230 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 FGFR1P11362 822 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 RXRAP19793 462 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 TECP42680 631 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 ACTR2P61160 394 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 ITGB3BPQ13352 177 aaPredicted RBP17.63■□□□□ 0.41
SSR4-204ENST00000370087 ANKRD54Q6NXT1 300 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 ASCL5Q7RTU5 278 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 THNSL1Q8IYQ7 743 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 ADAM2Q99965 735 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 TYW1Q9NV66 732 aaKnown RBP17.63■□□□□ 0.41
SSR4-204ENST00000370087 TMEM260Q9NX78 707 aa17.63■□□□□ 0.41
SSR4-204ENST00000370087 SEC63Q9UGP8 760 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms