RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SMIM10L2AP0DMW4 78 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 SMIM10L2BP0DMW5 78 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 ATP4AP20648 1035 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 PRKCEQ02156 737 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 UGCGQ16739 394 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 KCTD17Q8N5Z5 321 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 RGL1Q9NZL6 768 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 HDAC6Q9UBN7 1215 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 GTF2IRD1Q9UHL9 959 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 COL1A2P08123 1366 aa17.41■□□□□ 0.38
PRPF38B-202ENST00000370022 C17orf102A2RUQ5 167 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 ZNF862O60290 1169 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 HOXC8P31273 242 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 CYP4A11Q02928 519 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 PPFIA1Q13136 1202 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 TPH2Q8IWU9 490 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 ZNF579Q8NAF0 562 aaKnown RBP17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 SNX29Q8TEQ0 813 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 SPATA32Q96LK8 384 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 TLR3O15455 904 aaKnown RBP17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 SPATA31C1P0DKV0 1188 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.381e-12■□□□□ 10.1
PRPF38B-202ENST00000370022 CCT6AP40227 531 aaKnown RBP17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 UBA7P41226 1012 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 RTP1P59025 263 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 CTTNQ14247 550 aaKnown RBP17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 LRRC26Q2I0M4 334 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 ZNF484Q5JVG2 852 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 FAM126BQ8IXS8 530 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 ANP32EQ9BTT0 268 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 NIFKQ9BYG3 293 aaKnown RBP17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 CSRNP2Q9H175 543 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 PPME1Q9Y570 386 aa17.4■□□□□ 0.38
PRPF38B-202ENST00000370022 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 CUTAO60888 179 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 MED24O75448 989 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 INSRRP14616 1297 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 YWHABP31946 246 aaKnown RBP17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 GRIK4Q16099 956 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 NACC1Q96RE7 527 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 NT5C3AQ9H0P0 336 aa17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 WRAP73Q9P2S5 460 aaPredicted RBP17.39■□□□□ 0.37
PRPF38B-202ENST00000370022 STBD1O95210 358 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 TXLNAP40222 546 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 ME1P48163 572 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 GRIN1Q05586 938 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 PTGISQ16647 500 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 HYIQ5T013 277 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 LMBR1Q8WVP7 490 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 MMTAG2Q9BU76 263 aaKnown RBP17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 SETD4Q9NVD3 440 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 ATP11BQ9Y2G3 1177 aa17.38■□□□□ 0.37
PRPF38B-202ENST00000370022 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 PP2D1A8MPX8 630 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 PQBP1O60828 265 aaKnown RBP17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 CD4P01730 458 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 CDC25AP30304 524 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 ADAM17P78536 824 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 TLE2Q04725 743 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 GDF6Q6KF10 455 aaPredicted RBP17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 ANO5Q75V66 913 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 CABP7Q86V35 215 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 CALML4Q96GE6 196 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 CLIC6Q96NY7 704 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 ANKEF1Q9NU02 776 aa17.37■□□□□ 0.37
PRPF38B-202ENST00000370022 MBLAC1A4D2B0 266 aaPredicted RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 B4GALT4O60513 344 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 TARBP2Q15633 366 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 EXOC8Q8IYI6 725 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 TRMT13Q9NUP7 481 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 TUBE1Q9UJT0 475 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 DBR1Q9UK59 544 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 PCDHA7Q9UN72 937 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 KIAA1024Q9UPX6 916 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 MYH9P35579 1960 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 ZBTB42B2RXF5 422 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 MAGEB2O15479 319 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 RPLP2P05387 115 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 PTK7Q13308 1070 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 CSPP1Q1MSJ5 1256 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 MARCH8Q5T0T0 291 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 TRMT1LQ7Z2T5 733 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 SYMPKQ92797 1274 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 CHAMP1Q96JM3 812 aa17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 CCDC43Q96MW1 224 aaKnown RBP17.36■□□□□ 0.37
PRPF38B-202ENST00000370022 CYP26B1Q9NR63 512 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms