RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 GNAT1P11488 350 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 CARSP49589 748 aaKnown RBP17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 COASYQ13057 564 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 KIAA0753Q2KHM9 967 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 CFAP221Q4G0U5 840 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 FAM26FQ5R3K3 315 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 KCTD1Q719H9 257 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 OR2W6PQ8NHA6 318 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 KRT12Q99456 494 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 PIDD1Q9HB75 910 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 LMCD1Q9NZU5 365 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 LEMD3Q9Y2U8 911 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 THRAP3Q9Y2W1 955 aaKnown RBP17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 RIMBP2O15034 1052 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 RPS6KA4O75676 772 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 GPSM2P81274 684 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 FKBP3Q00688 224 aaKnown RBP17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 LRRC63Q05C16 580 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 LAMB3Q13751 1172 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 KLHDC7AQ5VTJ3 777 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 SLC30A9Q6PML9 568 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 C6orf89Q6UWU4 347 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
SYNCRIP-202ENST00000369622 GLI1P08151 1106 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 PPP4CP60510 307 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 LRRC55Q6ZSA7 311 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 PACSIN1Q9BY11 444 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 C15orf41Q9Y2V0 281 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 PHLPP1O60346 1717 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 MAP3K13O43283 966 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 HEXIM1O94992 359 aaKnown RBP17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 AKR1B1P15121 316 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 KLRC1P26715 233 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 GRAPQ13588 217 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 CNBD1Q8NA66 436 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 PRCCQ92733 491 aaPredicted RBP17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 ATXN2Q99700 1313 aaKnown RBP17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 SMNDC1O75940 238 aaKnown RBP eCLIP17.42■□□□□ 0.388e-8■■■□□ 15.9
SYNCRIP-202ENST00000369622 PYGBP11216 843 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 HNRNPH3P31942 346 aaKnown RBP17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 EPHB4P54760 987 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 KLHL30Q0D2K2 578 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 TRADDQ15628 312 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 B4GALNT2Q8NHY0 566 aa17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 ACTR5Q9H9F9 607 aaPredicted RBP17.42■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L15C9J2P7 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L13C9JLJ4 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L11C9JVI0 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L18D6R9N7 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L22D6RA61 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L17D6RBQ6 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L19D6RCP7 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L20D6RJB6 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 SMIM24O75264 130 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 LINGO3P0C6S8 592 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L24Q0WX57 530 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 HLTFQ14527 1009 aaKnown RBP eCLIP17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 ODF2Q5BJF6 829 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L6PQ6QN14 398 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 HOMEZQ8IX15 550 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 AGAP11Q8TF27 550 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 SEC16BQ96JE7 1060 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 KDM7AQ6ZMT4 941 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
SYNCRIP-202ENST00000369622 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 A0A087X0T9 212 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 POTECB2RU33 542 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 TLR2O60603 784 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 FAM228BP0C875 321 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 ACTN1P12814 892 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 STAT3P40763 770 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 GTF2IP78347 998 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 ADAM9Q13443 819 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 FAM133BQ5BKY9 247 aaKnown RBP17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 TCERG1LQ5VWI1 586 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 EZH1Q92800 747 aaPredicted RBP17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 PAIP2Q9BPZ3 127 aaKnown RBP17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 CASZ1Q86V15 1759 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 HGSO14964 777 aaPredicted RBP17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.382e-9■■■■□ 20.8
SYNCRIP-202ENST00000369622 HGSNATQ68CP4 663 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 ADGRF4Q8IZF3 695 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
SYNCRIP-202ENST00000369622 MEIS1O00470 390 aa17.39■□□□□ 0.38
SYNCRIP-202ENST00000369622 IFT20Q8IY31 132 aa17.39■□□□□ 0.38
SYNCRIP-202ENST00000369622 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.38
SYNCRIP-202ENST00000369622 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.38
SYNCRIP-202ENST00000369622 LUC7LQ9NQ29 371 aaKnown RBP17.39■□□□□ 0.38
SYNCRIP-202ENST00000369622 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
SYNCRIP-202ENST00000369622 EDIL3O43854 480 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms