RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 ATP6V0A4Q9HBG4 840 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 EPB41L5Q9HCM4 733 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 WDR91A4D1P6 747 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 HLFQ16534 295 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 PCGF5Q86SE9 256 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 GIMAP8Q8ND71 665 aaPredicted RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 PDCD6IPQ8WUM4 868 aaKnown RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 RMDN3Q96TC7 470 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 BCL2L12Q9HB09 334 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 RWDD2AQ9UIY3 292 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 IGSF1Q8N6C5 1336 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 USP17L5A8MUK1 530 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 KPNA2P52292 529 aaKnown RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 ZKSCAN8Q15776 578 aaPredicted RBP19.31■□□□□ 0.68
SNX27-203ENST00000368843 ZNF394Q53GI3 561 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 C10orf76Q5T2E6 689 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 SYNE4Q8N205 404 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 AFG1LQ8WV93 481 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 FEM1BQ9UK73 627 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 PCDHB6Q9Y5E3 794 aa19.31■□□□□ 0.68
SNX27-203ENST00000368843 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 PIDD1Q9HB75 910 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 INTS9Q9NV88 658 aaKnown RBP19.3■□□□□ 0.68
SNX27-203ENST00000368843 A0A1W2PQ27 194 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 A0A1W2PQ64 194 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 A0A1W2PQD8 194 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 ZBED1O96006 694 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 PHEXP78562 749 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 KIF23Q02241 960 aaPredicted RBP19.3■□□□□ 0.68
SNX27-203ENST00000368843 EPS15L1Q9UBC2 864 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 F5H423 210 aaPredicted RBP19.3■□□□□ 0.68
SNX27-203ENST00000368843 SERPING1P05155 500 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 TEX2Q8IWB9 1127 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 PPWD1Q96BP3 646 aaKnown RBP19.3■□□□□ 0.68
SNX27-203ENST00000368843 STAP2Q9UGK3 403 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 FAN1Q9Y2M0 1017 aa19.3■□□□□ 0.68
SNX27-203ENST00000368843 PSMD2Q13200 908 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 HABP4Q5JVS0 413 aaKnown RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 FRA10AC1Q70Z53 315 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 NHEJ1Q9H9Q4 299 aaPredicted RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 CYP2D6P10635 497 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 RECQLP46063 649 aaPredicted RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 DPCR1Q3MIW9 517 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 AFF2P51816 1311 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 SEPT2Q15019 361 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 SZRD1Q7Z422 152 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 NRBP1Q9UHY1 535 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 FAM196BA6NMK8 535 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 PLS3P13797 630 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 STMN1P16949 149 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 TRIM67Q6ZTA4 783 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 PDCD7Q8N8D1 485 aaKnown RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 PPARGP37231 505 aaPredicted RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 ALCAMQ13740 583 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 SLC13A4Q9UKG4 626 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 HIP1RO75146 1068 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 TSPY1Q01534 308 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 BHMT2Q9H2M3 363 aa19.29■□□□□ 0.68
SNX27-203ENST00000368843 DNAJC17Q9NVM6 304 aaKnown RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 SUCLA2Q9P2R7 463 aaPredicted RBP19.29■□□□□ 0.68
SNX27-203ENST00000368843 NFKBIAP25963 317 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 HOXD10P28358 340 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 KLC3Q6P597 504 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 PRPF38AQ8NAV1 312 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 TSR3Q9UJK0 312 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 JRKLQ9Y4A0 524 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 PGRMC1O00264 195 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 MT-ND3P03897 115 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 TCP11X2Q5H9J9 407 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 HPCAL4Q9UM19 191 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 AATKQ6ZMQ8 1374 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 KCNA4P22459 653 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 ZNF568Q3ZCX4 644 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 RHPN2Q8IUC4 686 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 PASD1Q8IV76 773 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 N4BP2L2Q92802 583 aaPredicted RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 TSPYL2Q9H2G4 693 aaPredicted RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.28■□□□□ 0.683e-7■■■■□ 20.1
SNX27-203ENST00000368843 SYNMO15061 1565 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 SLCO1A2P46721 670 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 MRPS25P82663 173 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 SMAD1Q15797 465 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 ZNF667Q5HYK9 610 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 TRIM42Q8IWZ5 723 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 OTUD5Q96G74 571 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 THAP9Q9H5L6 903 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 ROBO2Q9HCK4 1378 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 NEMP1O14524 444 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 IFT43Q96FT9 208 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 ERBB3P21860 1342 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 CLDN3O15551 220 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 LDHAP00338 332 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 PHKA2P46019 1235 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 FBXW4P57775 412 aa19.28■□□□□ 0.68
SNX27-203ENST00000368843 APOBEC3FQ8IUX4 373 aaKnown RBP19.28■□□□□ 0.68
SNX27-203ENST00000368843 PDE11AQ9HCR9 933 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms