RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ASIC2Q16515 512 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 SLC35G1Q2M3R5 365 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 TXNRD3Q86VQ6 643 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 CCDC26Q8TAB7 109 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 CCHCR1Q8TD31 782 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 UBLCP1Q8WVY7 318 aaPredicted RBP19.02■□□□□ 0.64
CHTOP-203ENST00000368690 XPO6Q96QU8 1125 aaKnown RBP19.02■□□□□ 0.64
CHTOP-203ENST00000368690 FAM129AQ9BZQ8 928 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 PACSIN2Q9UNF0 486 aaPredicted RBP19.02■□□□□ 0.64
CHTOP-203ENST00000368690 BZW2Q9Y6E2 419 aaKnown RBP19.02■□□□□ 0.64
CHTOP-203ENST00000368690 NRXN2Q9P2S2 1712 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 ASAP2O43150 1006 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 GNA11P29992 359 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 DNA2P51530 1060 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 MAGOHP61326 146 aaKnown RBP19.02■□□□□ 0.63
CHTOP-203ENST00000368690 SATB1Q01826 763 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 LETM2Q2VYF4 491 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 MYOCDQ8IZQ8 938 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 ANKS4BQ8N8V4 417 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 CCDC197Q8NCU1 140 aa19.02■□□□□ 0.63
CHTOP-203ENST00000368690 MAGOHBQ96A72 148 aaKnown RBP19.02■□□□□ 0.63
CHTOP-203ENST00000368690 NSUN4Q96CB9 384 aaKnown RBP19.02■□□□□ 0.63
CHTOP-203ENST00000368690 MAST2Q6P0Q8 1798 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 PALM3A6NDB9 673 aaPredicted RBP19.01■□□□□ 0.63
CHTOP-203ENST00000368690 F8VZ95 297 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 F8W031 263 aaPredicted RBP19.01■□□□□ 0.63
CHTOP-203ENST00000368690 CYTH3O43739 400 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 ATP6V1G2O95670 118 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 CCDC125Q86Z20 511 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 RAD54LQ92698 747 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 FAXDC2Q96IV6 333 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 PNMA5Q96PV4 448 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 MTMR9Q96QG7 549 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 SPZ1Q9BXG8 430 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 NEUROG2Q9H2A3 272 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 C6orf50Q9HD87 102 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 BATF3Q9NR55 127 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 IL17RBQ9NRM6 502 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 JAG2Q9Y219 1238 aa19.01■□□□□ 0.63
CHTOP-203ENST00000368690 CFAP73A6NFT4 308 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 CEP104O60308 925 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 RTN2O75298 545 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 PPFIA2O75334 1257 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 CLNS1AP54105 237 aaKnown RBP19■□□□□ 0.63
CHTOP-203ENST00000368690 RNASE9P60153 205 aaKnown RBP19■□□□□ 0.63
CHTOP-203ENST00000368690 PDIA5Q14554 519 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 SLMAPQ14BN4 828 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 HOOK3Q86VS8 718 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 TRIM59Q8IWR1 403 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 CUL5Q93034 780 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19■□□□□ 0.63
CHTOP-203ENST00000368690 TXLNGYQ9BZA5 131 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 EBF2Q9HAK2 575 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 BCCIPQ9P287 314 aaKnown RBP eCLIP19■□□□□ 0.63
CHTOP-203ENST00000368690 ADAMTS1Q9UHI8 967 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 SLC12A4Q9UP95 1085 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 EPB41L3Q9Y2J2 1087 aaPredicted RBP19■□□□□ 0.63
CHTOP-203ENST00000368690 SLFN11Q7Z7L1 901 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 LMBR1Q8WVP7 490 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 ZNF317Q96PQ6 595 aaPredicted RBP19■□□□□ 0.63
CHTOP-203ENST00000368690 RAB34Q9BZG1 259 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 GANQ9H2C0 597 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 NOD2Q9HC29 1040 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 GGA1Q9UJY5 639 aa19■□□□□ 0.63
CHTOP-203ENST00000368690 TTC7AQ9ULT0 858 aaPredicted RBP19■□□□□ 0.63
CHTOP-203ENST00000368690 NOC2LQ9Y3T9 749 aaKnown RBP19■□□□□ 0.63
CHTOP-203ENST00000368690 A0A0A6YYK5 440 aaPredicted RBP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 H0YIN7 160 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 C6orf229H3BNL8 230 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 PPP1R12AO14974 1030 aaPredicted RBP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 ALDH1B1P30837 517 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 TFAP4Q01664 338 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 EVX2Q03828 476 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 RAPGEF1Q13905 1077 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 KRT71Q3SY84 523 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 FBXO33Q7Z6M2 555 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 MASTLQ96GX5 879 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 RSRC1Q96IZ7 334 aaKnown RBP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 CDK5RAP3Q96JB5 506 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 PACSIN1Q9BY11 444 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 TMX4Q9H1E5 349 aaPredicted RBP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 SUCLA2Q9P2R7 463 aaPredicted RBP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 PPP2R5EQ16537 467 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 TMEM266Q2M3C6 531 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 TMEM119Q4V9L6 283 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 DDX42Q86XP3 938 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 ZC3H3Q8IXZ2 948 aaKnown RBP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 METTL13Q8N6R0 699 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHTOP-203ENST00000368690 QSER1Q2KHR3 1735 aa18.99■□□□□ 0.63
CHTOP-203ENST00000368690 ROBO3Q96MS0 1386 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 ESYT2A0FGR8 921 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 PHF20L1A8MW92 1017 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 KRIT1O00522 736 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 SSBP05455 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHTOP-203ENST00000368690 CYP2D6P10635 497 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 SMARCA1P28370 1054 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 NAPAP54920 295 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 NPEPPSP55786 919 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms