RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 PDCD2LQ9BRP1 358 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 C16orf70Q9BSU1 422 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 BCAS3Q9H6U6 928 aa11.3□□□□□ -0.6
TPM3-210ENST00000368530 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
TPM3-210ENST00000368530 CFBP00751 764 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 ATP2B1P20020 1258 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 HOXC8P31273 242 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 GNAQP50148 359 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
TPM3-210ENST00000368530 CELF3Q5SZQ8 465 aaKnown RBP11.29□□□□□ -0.6
TPM3-210ENST00000368530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.64e-6■□□□□ 9.7
TPM3-210ENST00000368530 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
TPM3-210ENST00000368530 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.61e-12■□□□□ 9.1
TPM3-210ENST00000368530 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 GRPEL1Q9HAV7 217 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
TPM3-210ENST00000368530 KIAA1217Q5T5P2 1943 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 SPTLC2O15270 562 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 YEATS4O95619 227 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 KRT2P35908 639 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
TPM3-210ENST00000368530 HTRA4P83105 476 aaPredicted RBP11.28□□□□□ -0.6
TPM3-210ENST00000368530 IKBKEQ14164 716 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 PGM5Q15124 567 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 LRSAM1Q6UWE0 723 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 SERINC5Q86VE9 423 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 DBF4BQ8NFT6 615 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
TPM3-210ENST00000368530 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 KATNAL1Q9BW62 490 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 AMNQ9BXJ7 453 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 FOXP1Q9H334 677 aaPredicted RBP11.28□□□□□ -0.6
TPM3-210ENST00000368530 DACT1Q9NYF0 836 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
TPM3-210ENST00000368530 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
TPM3-210ENST00000368530 COL4A4P53420 1690 aaPredicted RBP11.27□□□□□ -0.61
TPM3-210ENST00000368530 ZBTB5O15062 677 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 CYTH3O43739 400 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 EFCAB14O75071 495 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 LGR5O75473 907 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 XRCC6P12956 609 aaKnown RBP eCLIP11.27□□□□□ -0.619e-13■□□□□ 8.6
TPM3-210ENST00000368530 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.61
TPM3-210ENST00000368530 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
TPM3-210ENST00000368530 MRE11P49959 708 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 NLRP5P59047 1200 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 CAMK4Q16566 473 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 HEATR3Q7Z4Q2 680 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 HOMER1Q86YM7 354 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 SAMD3Q8N6K7 520 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 FSIP1Q8NA03 581 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
TPM3-210ENST00000368530 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.61
TPM3-210ENST00000368530 C17orf80Q9BSJ5 609 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 NUP62CLQ9H1M0 184 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 GOLPH3LQ9H4A5 285 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 ARIH1Q9Y4X5 557 aaPredicted RBP11.27□□□□□ -0.61
TPM3-210ENST00000368530 PCDHA1Q9Y5I3 950 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.61
TPM3-210ENST00000368530 SORBS3O60504 671 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 GPR37L1O60883 481 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 NR1I2O75469 434 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 GGPS1O95749 300 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 TGFB3P10600 412 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 MYCLP12524 364 aaPredicted RBP11.26□□□□□ -0.61
TPM3-210ENST00000368530 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
TPM3-210ENST00000368530 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 FAM117BQ6P1L5 589 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.26□□□□□ -0.61
TPM3-210ENST00000368530 SPATA33Q96N06 139 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 RBSNQ9H1K0 784 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 TSPY26PQ9H489 355 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
TPM3-210ENST00000368530 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
TPM3-210ENST00000368530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 RSPH10B2B2RC85 870 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 PI4K2BG5E9Z4 385 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 RSPH10BP0C881 870 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 ADAM17P78536 824 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 SLC39A14Q15043 492 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 EARS2Q5JPH6 523 aaKnown RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 CCDC73Q6ZRK6 1079 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 FAM122AQ96E09 287 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 RNPEPQ9H4A4 650 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms