RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 GRIN1Q05586 938 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 C2orf54Q08AI8 447 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 MTMR2Q13614 643 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 SWSAP1Q6NVH7 229 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 ITIH3Q06033 890 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 BFSP1Q12934 665 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 TRIM9Q9C026 710 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 TTC26A0AVF1 554 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 PSMD14O00487 310 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 HEXIM1O94992 359 aaKnown RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 MRPS25P82663 173 aaKnown RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 KRT76Q01546 638 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 CFAP157Q5JU67 520 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 APOBEC3FQ8IUX4 373 aaKnown RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 GUF1Q8N442 669 aaKnown RBP13.35□□□□□ -0.27
PTPRK-203ENST00000368207 EPB41L5Q9HCM4 733 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 FBXO40Q9UH90 709 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 DNAJC12Q9UKB3 198 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 INTS8Q75QN2 995 aaKnown RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 TAOK1Q7L7X3 1001 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 TMEM39BQ9GZU3 492 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 STXBP3O00186 592 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 MYCP01106 439 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 ZNF394Q53GI3 561 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 HHATQ5VTY9 493 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 KSR1Q8IVT5 923 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 PDE11AQ9HCR9 933 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 ENTPD3O75355 529 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 NFIAQ12857 509 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 SNX1Q13596 522 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 EZH2Q15910 746 aaKnown RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-203ENST00000368207 TRIM50Q86XT4 487 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 PROM2Q8N271 834 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
PTPRK-203ENST00000368207 DPEP1P16444 411 aa13.33□□□□□ -0.27
PTPRK-203ENST00000368207 FMR1Q06787 632 aaKnown RBP eCLIP13.33□□□□□ -0.27
PTPRK-203ENST00000368207 ALCAMQ13740 583 aa13.33□□□□□ -0.27
PTPRK-203ENST00000368207 IQCB1Q15051 598 aa13.33□□□□□ -0.27
PTPRK-203ENST00000368207 ADGRA1Q86SQ6 560 aa13.33□□□□□ -0.27
PTPRK-203ENST00000368207 CROCCP2Q86T23 111 aa13.33□□□□□ -0.27
PTPRK-203ENST00000368207 PLCD3Q8N3E9 789 aa13.33□□□□□ -0.27
PTPRK-203ENST00000368207 DENND3A2RUS2 1198 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 USP27XA6NNY8 438 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 NPHP3-ACAD11A0A0J9YXS1 232 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 PGRMC1O00264 195 aaKnown RBP13.33□□□□□ -0.28
PTPRK-203ENST00000368207 ALDH3A1P30838 453 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 GABPB1Q06547 395 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-203ENST00000368207 KCTD16Q68DU8 428 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 PODXL2Q9NZ53 605 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 COL5A2P05997 1499 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-203ENST00000368207 PPP4CP60510 307 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 KCNB2Q92953 911 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 CABS1Q96KC9 395 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-203ENST00000368207 MIS12Q9H081 205 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 ACAD9Q9H845 621 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
PTPRK-203ENST00000368207 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-203ENST00000368207 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 GRK7Q8WTQ7 553 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 FAM213AQ9BRX8 229 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
PTPRK-203ENST00000368207 TRIM49P0CI25 452 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 TRIM49CP0CI26 452 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
PTPRK-203ENST00000368207 H7C0C1 242 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 ATF2P15336 505 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 ATP5OP48047 213 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 NFX1Q12986 1120 aaKnown RBP13.32□□□□□ -0.28
PTPRK-203ENST00000368207 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 PARD6BQ9BYG5 372 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 CLDN3O15551 220 aa13.32□□□□□ -0.28
PTPRK-203ENST00000368207 XPOTO43592 962 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms