RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 OXCT2Q9BYC2 517 aaPredicted RBP9.13□□□□□ -0.95
CD46-209ENST00000367047 DCLRE1BQ9H816 532 aa9.13□□□□□ -0.95
CD46-209ENST00000367047 ZNF180Q9UJW8 692 aa9.13□□□□□ -0.95
CD46-209ENST00000367047 CCDC169A6NNP5 214 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 KRIT1O00522 736 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 NKRFO15226 690 aaKnown RBP eCLIP9.12□□□□□ -0.95
CD46-209ENST00000367047 ZFXP17010 805 aaPredicted RBP9.12□□□□□ -0.95
CD46-209ENST00000367047 MLH1P40692 756 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 CDK17Q00537 523 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 ADCY1Q08828 1119 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 MGAT5Q09328 741 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 RCN1Q15293 331 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 ZNF174Q15697 407 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 NTRK3Q16288 839 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 CFAP157Q5JU67 520 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 DENND2CQ68D51 928 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 INTS8Q75QN2 995 aaKnown RBP9.12□□□□□ -0.95
CD46-209ENST00000367047 NANOGNBQ7Z5D8 188 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 ZNF554Q86TJ5 538 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 RIBC1Q8N443 379 aaPredicted RBP9.12□□□□□ -0.95
CD46-209ENST00000367047 LZICQ8WZA0 190 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
CD46-209ENST00000367047 MPP4Q96JB8 637 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 FMO2Q99518 471 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 SIKE1Q9BRV8 207 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 NACA2Q9H009 215 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 NLRC4Q9NPP4 1024 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 FAM114A2Q9NRY5 505 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 TBC1D7Q9P0N9 293 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 CTNNAL1Q9UBT7 734 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 USP20Q9Y2K6 914 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 SIGLEC16A6NMB1 481 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 LSM1O15116 133 aaKnown RBP9.12□□□□□ -0.95
CD46-209ENST00000367047 GJB6O95452 261 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 LYNP07948 512 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 ITGA4P13612 1032 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 KLRC1P26715 233 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 FKBP4Q02790 459 aaKnown RBP eCLIP9.12□□□□□ -0.95
CD46-209ENST00000367047 PARP6Q2NL67 630 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 SLC4A8Q2Y0W8 1093 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 CYB5R4Q7L1T6 521 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 SPATA24Q86W54 205 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 AGGF1Q8N302 714 aaeCLIP9.12□□□□□ -0.95
CD46-209ENST00000367047 EIF1ADQ8N9N8 165 aaKnown RBP9.12□□□□□ -0.95
CD46-209ENST00000367047 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 NCSTNQ92542 709 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 ERP27Q96DN0 273 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 HAPLN3Q96S86 360 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 CENPKQ9BS16 269 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 KCNK9Q9NPC2 374 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 PPLO60437 1756 aa9.12□□□□□ -0.95
CD46-209ENST00000367047 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 GALK1P51570 392 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 ADARP55265 1226 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 OXCT1P55809 520 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 SLC29A2Q14542 456 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 RPS6KA1Q15418 735 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 TRIM50Q86XT4 487 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 ECHDC2Q86YB7 292 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 SLC15A3Q8IY34 581 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 ANKLE1Q8NAG6 615 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 ATP11CQ8NB49 1132 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 PPFIBP2Q8ND30 876 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 NR1H4Q96RI1 486 aaPredicted RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 TUBGCP5Q96RT8 1024 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 TRIM51Q9BSJ1 452 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 ZMYND12Q9H0C1 365 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 MYLK2Q9H1R3 596 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 TDRKHQ9Y2W6 561 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 LAMA4Q16363 1823 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 POGZQ7Z3K3 1410 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 BOLA2-SMG1P6H3BVE0 249 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 O00370 1275 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 CAPN9O14815 690 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 GTPBP6O43824 516 aaPredicted RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 GNAT2P19087 354 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 HOXD12P35452 270 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 KCNMA1Q12791 1236 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 TTLL12Q14166 644 aaPredicted RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 CCDC152Q4G0S7 254 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 ADSSL1Q8N142 457 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 EPS8L3Q8TE67 593 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 ARHGEF2Q92974 986 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 PGM2Q96G03 612 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.11□□□□□ -0.95
CD46-209ENST00000367047 MIS12Q9H081 205 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 KIAA1683Q9H0B3 1180 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 FOXP1Q9H334 677 aaPredicted RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 CCDC134Q9H6E4 229 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 PFDN4Q9NQP4 134 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 FAM217BQ9NTX9 383 aaPredicted RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 CLIC5Q9NZA1 410 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 CIDEBQ9UHD4 219 aa9.11□□□□□ -0.95
CD46-209ENST00000367047 R3HDM2Q9Y2K5 976 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 UTP11Q9Y3A2 253 aaKnown RBP9.11□□□□□ -0.95
CD46-209ENST00000367047 B4E1Z4 1266 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms