RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 DHX15O43143 795 aaKnown RBP17.38■□□□□ 0.37
PRKN-203ENST00000366894 STX6O43752 255 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 LGR5O75473 907 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 SMIM10L2AP0DMW4 78 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 SMIM10L2BP0DMW5 78 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 ATP2B1P20020 1258 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 SYT1P21579 422 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
PRKN-203ENST00000366894 TTC38Q5R3I4 469 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 ABHD15Q6UXT9 468 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 ZNF365Q70YC5 407 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 MIER3Q7Z3K6 550 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 EXOC8Q8IYI6 725 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 AFAP1L1Q8TED9 768 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 ATP6V0A1Q93050 837 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 PCYT2Q99447 389 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 GAS2L1Q99501 681 aaPredicted RBP17.38■□□□□ 0.37
PRKN-203ENST00000366894 KCNMB3Q9NPA1 279 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 ZNF302Q9NR11 478 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 TRIP12Q14669 1992 aaPredicted RBP17.38■□□□□ 0.37
PRKN-203ENST00000366894 SCN5AQ14524 2016 aa17.38■□□□□ 0.37
PRKN-203ENST00000366894 DDX39AO00148 427 aaKnown RBP17.37■□□□□ 0.37
PRKN-203ENST00000366894 PSMD10O75832 226 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 PARNO95453 639 aaKnown RBP17.37■□□□□ 0.37
PRKN-203ENST00000366894 IQCF3P0C7M6 154 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 MCM7P33993 719 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 RBL2Q08999 1139 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 PPP2R5CQ13362 524 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 BFSP2Q13515 415 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 PDXDC2PQ6P474 469 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 ERMNQ8TAM6 284 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 ETNPPLQ8TBG4 499 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 UIMC1Q96RL1 719 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 RNPEPQ9H4A4 650 aa17.37■□□□□ 0.37
PRKN-203ENST00000366894 IGKV6D-21A0A0A0MT36 114 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 C17orf102A2RUQ5 167 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 HBP1O60381 514 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 CCNE2O96020 404 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 COL9A1P20849 921 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 ADAM17P78536 824 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 PTK7Q13308 1070 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 GPNMBQ14956 572 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 SWSAP1Q6NVH7 229 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 RSPH3Q86UC2 560 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 ZNF710Q8N1W2 664 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 CAGE1Q8TC20 777 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 NEK9Q8TD19 979 aa17.36■□□□□ 0.37
PRKN-203ENST00000366894 BBXQ8WY36 941 aaPredicted RBP17.36■□□□□ 0.37
PRKN-203ENST00000366894 TTC12Q9H892 705 aaPredicted RBP17.36■□□□□ 0.37
PRKN-203ENST00000366894 POTEB3A0JP26 581 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 TREHO43280 583 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 P4HBP07237 508 aaKnown RBP17.35■□□□□ 0.37
PRKN-203ENST00000366894 CKBP12277 381 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 TXKP42681 527 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 PDIA5Q14554 519 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 ZNF174Q15697 407 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 EARS2Q5JPH6 523 aaKnown RBP17.35■□□□□ 0.37
PRKN-203ENST00000366894 ZNF484Q5JVG2 852 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 PSRC1Q6PGN9 363 aaPredicted RBP17.35■□□□□ 0.37
PRKN-203ENST00000366894 POTEBQ6S5H4 581 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 ATXN2LQ8WWM7 1075 aaKnown RBP17.35■□□□□ 0.37
PRKN-203ENST00000366894 HERVK_113Q902F9 699 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
PRKN-203ENST00000366894 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
PRKN-203ENST00000366894 MAFBQ9Y5Q3 323 aaPredicted RBP17.35■□□□□ 0.37
PRKN-203ENST00000366894 SLC37A4O43826 429 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
PRKN-203ENST00000366894 PRPHP41219 470 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 PSMC5P62195 406 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 EPHA7Q15375 998 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
PRKN-203ENST00000366894 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
PRKN-203ENST00000366894 LMBR1Q8WVP7 490 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 JPH2Q9BR39 696 aaPredicted RBP17.34■□□□□ 0.37
PRKN-203ENST00000366894 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 THEGQ9P2T0 379 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 TRPC6Q9Y210 931 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 PPME1Q9Y570 386 aa17.34■□□□□ 0.37
PRKN-203ENST00000366894 TET1Q8NFU7 2136 aa17.33■□□□□ 0.37
PRKN-203ENST00000366894 GRXCR1A8MXD5 290 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 CAND2O75155 1236 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 FGBP02675 491 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 SELPP16109 830 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 MARK3P27448 753 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 RFC2P35250 354 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 QARSP47897 775 aaKnown RBP17.33■□□□□ 0.36
PRKN-203ENST00000366894 ATL3Q6DD88 541 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 TAF2Q6P1X5 1199 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 LRRC8DQ7L1W4 858 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 OTOP2Q7RTS6 562 aa17.33■□□□□ 0.36
PRKN-203ENST00000366894 DEFB128Q7Z7B8 93 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms