RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 CCDC155Q8N6L0 562 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 KCNB2Q92953 911 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 WNT8BQ93098 351 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 PSTPIP2Q9H939 334 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 MLXIPQ9HAP2 919 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 RTEL1Q9NZ71 1219 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 LGALS2P05162 132 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 CKBP12277 381 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 ACTN1P12814 892 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 ATP2A2P16615 1042 aaKnown RBP12.76□□□□□ -0.37
H3F3A-203ENST00000366815 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
H3F3A-203ENST00000366815 PTK7Q13308 1070 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 NEDD9Q14511 834 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 KRT32Q14532 448 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 UBE2SQ16763 222 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
H3F3A-203ENST00000366815 CCDC136Q96JN2 1154 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 GPR20Q99678 358 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 SENP7Q9BQF6 1050 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 PRDM12Q9H4Q4 367 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
H3F3A-203ENST00000366815 TELO2Q9Y4R8 837 aa12.76□□□□□ -0.37
H3F3A-203ENST00000366815 H3BRB1 525 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 ZBTB43O43298 467 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 NBNO60934 754 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
H3F3A-203ENST00000366815 CXCL10P02778 98 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 MYOGP15173 224 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 WWC2Q6AWC2 1192 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 HEATR3Q7Z4Q2 680 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 SERINC5Q86VE9 423 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 USP26Q9BXU7 913 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
H3F3A-203ENST00000366815 TUT1Q9H6E5 874 aaKnown RBP12.75□□□□□ -0.37
H3F3A-203ENST00000366815 SLC28A3Q9HAS3 691 aa12.75□□□□□ -0.37
H3F3A-203ENST00000366815 NOP56O00567 594 aaKnown RBP12.74□□□□□ -0.37
H3F3A-203ENST00000366815 ATP9AO75110 1047 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 KCNA2P16389 499 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 ITGB5P18084 799 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 CDC27P30260 824 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 HSPA4P34932 840 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 RCAN1P53805 252 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 ADGRE1Q14246 886 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 MBTPS1Q14703 1052 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 RTN1Q16799 776 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 TCTN1Q2MV58 587 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 PHOSPHO2Q8TCD6 241 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 GPRASP2Q96D09 838 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 GMPR2Q9P2T1 348 aaKnown RBP12.74□□□□□ -0.37
H3F3A-203ENST00000366815 UBIAD1Q9Y5Z9 338 aa12.74□□□□□ -0.37
H3F3A-203ENST00000366815 TRANK1O15050 2925 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 HMGB1P09429 215 aaKnown RBP12.73□□□□□ -0.37
H3F3A-203ENST00000366815 CPA1P15085 419 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 WDR5P61964 334 aaKnown RBP12.73□□□□□ -0.37
H3F3A-203ENST00000366815 CNKSR3Q6P9H4 555 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 TRIM50Q86XT4 487 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 HERC6Q8IVU3 1022 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 TEX2Q8IWB9 1127 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
H3F3A-203ENST00000366815 BANK1Q8NDB2 785 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 GAS2L1Q99501 681 aaPredicted RBP12.73□□□□□ -0.37
H3F3A-203ENST00000366815 RNPEPQ9H4A4 650 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
H3F3A-203ENST00000366815 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 NID2Q14112 1375 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 SIP14410 1827 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 STXBP3O00186 592 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 TREHO43280 583 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 CA3P07451 260 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 SMCPP49901 116 aaPredicted RBP12.72□□□□□ -0.37
H3F3A-203ENST00000366815 ADAM17P78536 824 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 FBXL16Q8N461 479 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 ATP6V0A1Q93050 837 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 CDHR1Q96JP9 859 aa12.72□□□□□ -0.37
H3F3A-203ENST00000366815 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms