RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 KRT76Q01546 638 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 CEP170P1Q96L14 293 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 MRPL40Q9NQ50 206 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 HNRNPCL1O60812 293 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 NR3C1P04150 777 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ATP1A3P13637 1013 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 AP3M2P53677 418 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ARMCX2Q7L311 632 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 FRMD5Q7Z6J6 570 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ANKRD20A2Q5SQ80 823 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ANKRD20A1Q5TYW2 823 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 PODNQ7Z5L7 613 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 UBE2TQ9NPD8 197 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 PRPF31Q8WWY3 499 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 DHX34Q14147 1143 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 FER1L4A9Z1Z3 1794 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 MYH6P13533 1939 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 SLC16A3O15427 465 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 STMN1P16949 149 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 ARL13BQ3SXY8 428 aa12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 DHX38Q92620 1227 aaKnown RBP12.95□□□□□ -0.34
CDC42BPA-203ENST00000366766 CYP27B1O15528 508 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 LRRN2O75325 713 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 GSTA1P08263 222 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 GSTA2P09210 222 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 KCTD16Q68DU8 428 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 CC2D1AQ6P1N0 951 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 SYDE1Q6ZW31 735 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 CFAP61Q8NHU2 1237 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 SUGCTQ9HAC7 445 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 CYP26B1Q9NR63 512 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 AFG3L2Q9Y4W6 797 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 WDR64B1ANS9 1081 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 TTC4O95801 387 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 KIRREL3Q8IZU9 778 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 RAD54LQ92698 747 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 SPARCL1Q14515 664 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 SLC12A6Q9UHW9 1150 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 ADAM21Q9UKJ8 722 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 MRFAP1Q9Y605 127 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 MROH7-TTC4A0A0A0MT08 1334 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 SEC31BQ9NQW1 1179 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 ABCB11O95342 1321 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 FAM187AA6NFU0 413 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 PRPSAP2O60256 369 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 PPFIA2O75334 1257 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 APBA3O96018 575 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 KLC3Q6P597 504 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 DHX40Q8IX18 779 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 MYO5BQ9ULV0 1848 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 FGGP02679 453 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■□□□□ 10.9
CDC42BPA-203ENST00000366766 FEM1BQ9UK73 627 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 CAPN11Q9UMQ6 739 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 PTPN22Q9Y2R2 807 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
CDC42BPA-203ENST00000366766 KRT38O76015 456 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KRT1P04264 644 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KCTD6Q8NC69 237 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 PRKAB2O43741 272 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 VPS41P49754 854 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 NFKBIAP25963 317 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 SNRPFP62306 86 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KNOP1Q1ED39 458 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KLHL29Q96CT2 875 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 TBC1D10CQ8IV04 446 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KLC2Q9H0B6 622 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 NEDD4P46934 1319 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 MT-ND3P03897 115 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 KRT7P08729 469 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 DYNLL1P63167 89 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 TNFAIP2Q03169 654 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 GRAMD1CQ8IYS0 662 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 NME8Q8N427 588 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 OSBPL9Q96SU4 736 aa12.93□□□□□ -0.34
CDC42BPA-203ENST00000366766 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms