RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 CAPN7Q9Y6W3 813 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
SMC3-201ENST00000361804 USH1GQ495M9 461 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 ICE2Q659A1 982 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 SSU72P8A0A1W2PR75 194 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 ATP2C2O75185 946 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 NR1D1P20393 614 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 ECHS1P30084 290 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 TCP10Q12799 353 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 UBAP2Q5T6F2 1119 aaKnown RBP11.6□□□□□ -0.55
SMC3-201ENST00000361804 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
SMC3-201ENST00000361804 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
SMC3-201ENST00000361804 BPTFQ12830 3046 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 LLGL1Q15334 1064 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 PRR16Q569H4 304 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 RNF187Q5TA31 235 aaPredicted RBP11.59□□□□□ -0.55
SMC3-201ENST00000361804 SFR1Q86XK3 245 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 DHX37Q8IY37 1157 aaKnown RBP11.59□□□□□ -0.55
SMC3-201ENST00000361804 CRYGNQ8WXF5 182 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 SPAG5Q96R06 1193 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 OSGEPQ9NPF4 335 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 HDAC9Q9UKV0 1011 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 A0A087WUV0 522 aaPredicted RBP11.59□□□□□ -0.55
SMC3-201ENST00000361804 LDHCP07864 332 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 SLC27A3Q5K4L6 730 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 LOC285556D6RIA3 1793 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 PAPPA2Q9BXP8 1791 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 AKAP3O75969 853 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 INPP5BP32019 993 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 PAK2Q13177 524 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 COBLL1Q53SF7 1204 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 AADACL2Q6P093 401 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 IRF2BP2Q7Z5L9 587 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 TRPC5Q9UL62 973 aaPredicted RBP11.59□□□□□ -0.55
SMC3-201ENST00000361804 PCDHB13Q9Y5F0 798 aa11.59□□□□□ -0.55
SMC3-201ENST00000361804 E7EVH7 732 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 RBAK-RBAKDNI3L0D1 243 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 OPLAHO14841 1288 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 DAPK3O43293 454 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 LRRN2O75325 713 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 FGFR1OPO95684 399 aaKnown RBP11.58□□□□□ -0.55
SMC3-201ENST00000361804 HSD17B3P37058 310 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 METTL13Q8N6R0 699 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 TRIM51Q9BSJ1 452 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 RAB34Q9BZG1 259 aa11.58□□□□□ -0.55
SMC3-201ENST00000361804 UCHL3P15374 230 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 ABCB4P21439 1286 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 HOXA13P31271 388 aaPredicted RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 ITIH3Q06033 890 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 RPS6KA1Q15418 735 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 CDC37Q16543 378 aaPredicted RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 ALS2CLQ60I27 953 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 RPGRQ92834 1020 aaKnown RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 RIC8AQ9NPQ8 531 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 PCDHGC5Q9Y5F6 944 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 TTI1O43156 1089 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 GFPT2O94808 682 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 IFT88Q13099 833 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 PDIA5Q14554 519 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 COG2Q14746 738 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 QPCTQ16769 361 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 CATSPER3Q86XQ3 398 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 UBLCP1Q8WVY7 318 aaPredicted RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 REEP2Q9BRK0 252 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 RGL1Q9NZL6 768 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 CNOT8Q9UFF9 292 aaKnown RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 SART1O43290 800 aaKnown RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 HNRNPH1P31943 449 aaKnown RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 ZNF211Q13398 564 aaPredicted RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 DPY19L2P1Q6NXN4 242 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 RNF10Q8N5U6 811 aaKnown RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
SMC3-201ENST00000361804 PIGOQ8TEQ8 1089 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 CUL5Q93034 780 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 ZNF287Q9HBT7 754 aa11.58□□□□□ -0.56
SMC3-201ENST00000361804 ATRNL1Q5VV63 1379 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 ZNFX1Q9P2E3 1918 aaKnown RBP11.57□□□□□ -0.56
SMC3-201ENST00000361804 IGSF9BQ9UPX0 1349 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 KIF4AO95239 1232 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 PON1P27169 355 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 PPP1R2P41236 205 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 UBXN2AP68543 259 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 PRPF4BQ13523 1007 aaKnown RBP11.57□□□□□ -0.56
SMC3-201ENST00000361804 QRICH1Q2TAL8 776 aa11.57□□□□□ -0.56
SMC3-201ENST00000361804 ZC2HC1CQ53FD0 456 aaPredicted RBP11.57□□□□□ -0.56
SMC3-201ENST00000361804 ALKBH5Q6P6C2 394 aaKnown RBP11.57□□□□□ -0.56
SMC3-201ENST00000361804 TRMT1LQ7Z2T5 733 aaKnown RBP11.57□□□□□ -0.56
SMC3-201ENST00000361804 ZNF473Q8WTR7 871 aaKnown RBP11.57□□□□□ -0.56
SMC3-201ENST00000361804 U2AF1L4Q8WU68 220 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms