RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 HOOK2Q96ED9 719 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 RNF14Q9UBS8 474 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 ATP8A1Q9Y2Q0 1164 aa13.33□□□□□ -0.28
COL20A1-201ENST00000358894 CHD2O14647 1828 aaKnown RBP13.33□□□□□ -0.28
COL20A1-201ENST00000358894 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ABL1P00519 1130 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 LMNB1P20700 586 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 BIRC2Q13490 618 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 BEND6Q5SZJ8 279 aaPredicted RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ANKS4BQ8N8V4 417 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ERGIC2Q96RQ1 377 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 DNAJC7Q99615 494 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 SH2D3AQ9BRG2 576 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 GOLPH3Q9H4A6 298 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 CAPN6Q9Y6Q1 641 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 SASH3O75995 380 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 TRIM49P0CI25 452 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 TRIM49CP0CI26 452 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 HERVK_113P62684 666 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 AOC3Q16853 763 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 DENND2CQ68D51 928 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 TBC1D31Q96DN5 1066 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 DDX47Q9H0S4 455 aaKnown RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 KCND1Q9NSA2 647 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 SUFUQ9UMX1 484 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 PTPN22Q9Y2R2 807 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ECE2O60344 883 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ZBED4O75132 1171 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 MAGOHBQ96A72 148 aaKnown RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 A6NNZ2 444 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 C21orf2O43822 256 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 NDUFB10O96000 172 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 NMT1P30419 496 aaKnown RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 PLTPP55058 493 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 TUBB8Q3ZCM7 444 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 STMN4Q9H169 189 aaPredicted RBP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 ODF2LQ9ULJ1 636 aa13.32□□□□□ -0.28
COL20A1-201ENST00000358894 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL20A1-201ENST00000358894 SLC9A1P19634 815 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 TMEM139Q8IV31 216 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 PROCA1Q8NCQ7 364 aaPredicted RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 KIAA0895Q8NCT3 520 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 MGARPQ8TDB4 240 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 DUSP9Q99956 384 aaKnown RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 NSRP1Q9H0G5 558 aaKnown RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 ANKZF1Q9H8Y5 726 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 SAMD15Q9P1V8 674 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 USP11P51784 963 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 DHX9Q08211 1270 aaKnown RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 FAM20AQ96MK3 541 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 REEP2Q9BRK0 252 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 ESYT2A0FGR8 921 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 FGGP02679 453 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 STRN3Q13033 797 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 NEDD9Q14511 834 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 PHLDB2Q86SQ0 1253 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 POMGNT1Q8WZA1 660 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
COL20A1-201ENST00000358894 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
COL20A1-201ENST00000358894 H3BQF6 201 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-201ENST00000358894 ARHGAP25P42331 645 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 IFT88Q13099 833 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 CCDC6Q16204 474 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 GLYCTKQ8IVS8 523 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 N4BP2L2Q92802 583 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-201ENST00000358894 YY1AP1Q9H869 796 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 TYW1Q9NV66 732 aaKnown RBP13.3□□□□□ -0.28
COL20A1-201ENST00000358894 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 MTRQ99707 1265 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
COL20A1-201ENST00000358894 L1RE1Q9UN81 338 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 DAAM1Q9Y4D1 1078 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 HNRNPDLO14979 420 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms