RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 LRWD1Q9UFC0 647 aa27.26■■□□□ 1.95
ALKAL1-201ENST00000358543 COL1A2P08123 1366 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 OATP04181 439 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 PRKCEQ02156 737 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 GRIK4Q16099 956 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 XKR3Q5GH77 459 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 ZNF484Q5JVG2 852 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 C4orf19Q8IY42 314 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 LMBR1Q8WVP7 490 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 DYDC2Q96IM9 177 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 CTAGE1Q96RT6 745 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 ZSWIM4Q9H7M6 989 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 TMEM39AQ9NV64 488 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 RGL1Q9NZL6 768 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 TBX21Q9UL17 535 aa27.25■■□□□ 1.95
ALKAL1-201ENST00000358543 KIAA0355O15063 1070 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 STBD1O95210 358 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 SLC39A14Q15043 492 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 LXNQ9BS40 222 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 POLR3CQ9BUI4 534 aaPredicted RBP27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 NIFKQ9BYG3 293 aaKnown RBP27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 TUFT1Q9NNX1 390 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 NOD1Q9Y239 953 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 PDE4DIPQ5VU43 2346 aa27.24■■□□□ 1.95
ALKAL1-201ENST00000358543 MBLAC1A4D2B0 266 aaPredicted RBP27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 LYPLA2O95372 231 aa27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 ZNF200P98182 395 aaPredicted RBP27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 MARCH8Q5T0T0 291 aa27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 TPH2Q8IWU9 490 aa27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 PRKAG2Q9UGJ0 569 aa27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 ATP6V1DQ9Y5K8 247 aa27.23■■□□□ 1.95
ALKAL1-201ENST00000358543 MYH15Q9Y2K3 1946 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 VWA3AA6NCI4 1184 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 TREHO43280 583 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 SPATA31C1P0DKV0 1188 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 MUTP22033 750 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 RPA1P27694 616 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 CYP4A11Q02928 519 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 CEBPZQ03701 1054 aaKnown RBP27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 PTK7Q13308 1070 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 CTTNQ14247 550 aaKnown RBP27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 HAUS3Q68CZ6 603 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 SERINC5Q86VE9 423 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 CATSPER3Q86XQ3 398 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 LINC00301Q8NCQ3 95 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 AK8Q96MA6 479 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 WRAP73Q9P2S5 460 aaPredicted RBP27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 TFIP11Q9UBB9 837 aaKnown RBP27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 CFAP45Q9UL16 551 aa27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 TRIP12Q14669 1992 aaPredicted RBP27.22■■□□□ 1.95
ALKAL1-201ENST00000358543 TRIM43BA6NCK2 446 aa27.21■■□□□ 1.95
ALKAL1-201ENST00000358543 ZBTB42B2RXF5 422 aa27.21■■□□□ 1.95
ALKAL1-201ENST00000358543 SH3RF1Q7Z6J0 888 aa27.21■■□□□ 1.95
ALKAL1-201ENST00000358543 TRIM43Q96BQ3 446 aaPredicted RBP27.21■■□□□ 1.95
ALKAL1-201ENST00000358543 CIZ1Q9ULV3 898 aaPredicted RBP27.21■■□□□ 1.95
ALKAL1-201ENST00000358543 SRPRBQ9Y5M8 271 aaKnown RBP27.21■■□□□ 1.95
ALKAL1-201ENST00000358543 YEATS4O95619 227 aa27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 CYP2C9P11712 490 aa27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 XRCC6P12956 609 aaKnown RBP eCLIP27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 LONP1P36776 959 aaKnown RBP27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 TARBP2Q15633 366 aaKnown RBP27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 ANO5Q75V66 913 aa27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 TRMT1LQ7Z2T5 733 aaKnown RBP27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 PRDM5Q9NQX1 630 aaPredicted RBP27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 TUBE1Q9UJT0 475 aa27.2■■□□□ 1.94
ALKAL1-201ENST00000358543 DDX11L8A8MPP1 907 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 PPP6R2O75170 966 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 MED24O75448 989 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 YWHABP31946 246 aaKnown RBP27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 IGBP1P78318 339 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 RBL2Q08999 1139 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 STK38Q15208 465 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 KRT79Q5XKE5 535 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 TAF2Q6P1X5 1199 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 OTUD6AQ7L8S5 288 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 CAGE1Q8TC20 777 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 NOC4LQ9BVI4 516 aaKnown RBP27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 FBXO2Q9UK22 296 aaPredicted RBP27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 PPME1Q9Y570 386 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 PCDHA2Q9Y5H9 948 aa27.19■■□□□ 1.94
ALKAL1-201ENST00000358543 PITPNM1O00562 1244 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 TIMP1P01033 207 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 RPLP2P05387 115 aaKnown RBP27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 MARCKSP29966 332 aaPredicted RBP27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 DNM1Q05193 864 aaKnown RBP27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 BFSP2Q13515 415 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 FOXD4L6Q3SYB3 417 aaPredicted RBP27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 MTHFD1LQ6UB35 978 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 FOXD4L3Q6VB84 417 aaPredicted RBP27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 RPAINQ86UA6 219 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 CCDC155Q8N6L0 562 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 TRAPPC12Q8WVT3 735 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 HIPK3Q9H422 1215 aa27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 SEPT9Q9UHD8 586 aaPredicted RBP27.18■■□□□ 1.94
ALKAL1-201ENST00000358543 SPTLC2O15270 562 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 MAGEB2O15479 319 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 SLC26A4O43511 780 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 KLRC1P26715 233 aa27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 CCT6AP40227 531 aaKnown RBP27.17■■□□□ 1.94
ALKAL1-201ENST00000358543 TRIM71Q2Q1W2 868 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms