RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 ME3Q16798 604 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 TCTN1Q2MV58 587 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 IER5Q5VY09 327 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 PDXDC2PQ6P474 469 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 DNAJB3Q8WWF6 145 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 PRDM12Q9H4Q4 367 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 MAFBQ9Y5Q3 323 aaPredicted RBP23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 A0A0C4DFX4 3053 aa23.19■■□□□ 1.3
PPP1CA-202ENST00000358239 WDR64B1ANS9 1081 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 EDIL3O43854 480 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 CTDNEP1O95476 244 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 CHRNA1P02708 482 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 MGAT3Q09327 533 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 SWSAP1Q6NVH7 229 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 SLC5A5Q92911 643 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 IFIH1Q9BYX4 1025 aaKnown RBP23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 ORC3Q9UBD5 711 aaPredicted RBP23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 KCNJ14Q9UNX9 436 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 SAMM50Q9Y512 469 aa23.18■■□□□ 1.3
PPP1CA-202ENST00000358239 CUL9Q8IWT3 2517 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 COL4A6Q14031 1691 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 CCDC194A0A1B0GVG4 234 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 SMIM35A0A1B0GVV1 85 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 M0QZ92 97 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 GAS7O60861 476 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 SFNP31947 248 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 MRPS6P82932 125 aaKnown RBP23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 ZNF484Q5JVG2 852 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 NME8Q8N427 588 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 BBXQ8WY36 941 aaPredicted RBP23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 RAD9AQ99638 391 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 TEKT3Q9BXF9 490 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 CEP131Q9UPN4 1083 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 SQORQ9Y6N5 450 aa23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 PRRC2BQ5JSZ5 2229 aaKnown RBP23.17■■□□□ 1.3
PPP1CA-202ENST00000358239 IGSF9BQ9UPX0 1349 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 JAK3P52333 1124 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 LRCH2Q5VUJ6 765 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 MTHFD1LQ6UB35 978 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 CKAP2LQ8IYA6 745 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 USP38Q8NB14 1042 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 FAM167AQ96KS9 214 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 MBOAT7Q96N66 472 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 UIMC1Q96RL1 719 aa23.16■■□□□ 1.3
PPP1CA-202ENST00000358239 TAP1Q03518 808 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 C8orf34Q49A92 452 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 FAM43BQ6ZT52 329 aaPredicted RBP23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 NECAB1Q8N987 351 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 RDM1Q8NG50 284 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 TRAPPC12Q8WVT3 735 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 NAP1L4Q99733 375 aaKnown RBP23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 FAM49AQ9H0Q0 323 aaPredicted RBP23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 BRMS1Q9HCU9 246 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 DISC1Q9NRI5 854 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 INSL6Q9Y581 213 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 CDY2AQ9Y6F7 541 aa23.15■■□□□ 1.3
PPP1CA-202ENST00000358239 LARGE1O95461 756 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 TDP2O95551 362 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 GCFC2P16383 781 aaKnown RBP23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 LPIN1Q14693 890 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 INF2Q27J81 1249 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 FBXO47Q5MNV8 452 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.14■■□□□ 1.291e-6■■■■□ 19.9
PPP1CA-202ENST00000358239 TSHZ1Q6ZSZ6 1077 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 NEK8Q86SG6 692 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 MYOCDQ8IZQ8 938 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 GABBR1Q9UBS5 961 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 DDX25Q9UHL0 483 aaKnown RBP23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 TRPV2Q9Y5S1 764 aa23.14■■□□□ 1.29
PPP1CA-202ENST00000358239 KDM3AQ9Y4C1 1321 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 PSMD10O75832 226 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 GHRP10912 638 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 FDPSP14324 419 aaKnown RBP23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 ATP4AP20648 1035 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 KLRC1P26715 233 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 PPP4R3AQ6IN85 833 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 TMCO2Q7Z6W1 182 aaPredicted RBP23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 NSUN7Q8NE18 718 aaKnown RBP23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 OSBPL7Q9BZF2 842 aa23.13■■□□□ 1.29
PPP1CA-202ENST00000358239 HTRA4P83105 476 aaPredicted RBP23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 ADGRE1Q14246 886 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 LETM2Q2VYF4 491 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 ETNPPLQ8TBG4 499 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 TOP1MTQ969P6 601 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 ZBTB10Q96DT7 871 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 CELF4Q9BZC1 486 aaKnown RBP23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 LIMCH1Q9UPQ0 1083 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 ARID2Q68CP9 1835 aa23.12■■□□□ 1.29
PPP1CA-202ENST00000358239 ZBTB42B2RXF5 422 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 KRT2P35908 639 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 FTHL17Q9BXU8 183 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 UNC45AQ9H3U1 944 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 NRBP2Q9NSY0 501 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 GJB4Q9NTQ9 266 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 REV3LO60673 3130 aa23.11■■□□□ 1.29
PPP1CA-202ENST00000358239 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.1■■□□□ 1.29
PPP1CA-202ENST00000358239 LCHNA4D1U4 455 aa23.1■■□□□ 1.29
PPP1CA-202ENST00000358239 MAGEB2O15479 319 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms