RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 PDIA5Q14554 519 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 KNOP1Q1ED39 458 aaKnown RBP7.43□□□□□ -1.22
RTN4-203ENST00000357376 FAM153CQ494X1 144 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 C4orf32Q8N8J7 132 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 TLR10Q9BXR5 811 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 STMN4Q9H169 189 aaPredicted RBP7.43□□□□□ -1.22
RTN4-203ENST00000357376 DHX36Q9H2U1 1008 aaKnown RBP7.43□□□□□ -1.22
RTN4-203ENST00000357376 RGL1Q9NZL6 768 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 FAM153AQ9UHL3 310 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 TTI1O43156 1089 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 TMOD1P28289 359 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 LSP1P33241 339 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 ZNF746Q6NUN9 644 aaPredicted RBP7.43□□□□□ -1.22
RTN4-203ENST00000357376 PHLDB2Q86SQ0 1253 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 NLRP14Q86W24 1093 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 ZNF384Q8TF68 577 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 TBC1D31Q96DN5 1066 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 PNMA5Q96PV4 448 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 CELF4Q9BZC1 486 aaKnown RBP7.43□□□□□ -1.22
RTN4-203ENST00000357376 JMJD4Q9H9V9 463 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 BLOC1S4Q9NUP1 217 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 DNAJC12Q9UKB3 198 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 ZNF263O14978 683 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 CLTAP09496 248 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 MYBP10242 640 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 LMNB1P20700 586 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 COPB2P35606 906 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 DR1Q01658 176 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 ZNF543Q08ER8 600 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 SNX1Q13596 522 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 ABCB5Q2M3G0 1257 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 FIGNQ5HY92 759 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 KLHDC7AQ5VTJ3 777 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 CASKIN2Q8WXE0 1202 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 TRIM51Q9BSJ1 452 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
RTN4-203ENST00000357376 ARFGEF2Q9Y6D5 1785 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 UBAP1LF5GYI3 381 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.222e-7■□□□□ 9.1
RTN4-203ENST00000357376 CUL1Q13616 776 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 NAA25Q14CX7 972 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 NAB2Q15742 525 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 ZKSCAN8Q15776 578 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 OTUD6AQ7L8S5 288 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 SPATS2Q86XZ4 545 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 ANKS1AQ92625 1134 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 HOOK2Q96ED9 719 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
RTN4-203ENST00000357376 REEP2Q9BRK0 252 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 UBE2TQ9NPD8 197 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 FAM114A2Q9NRY5 505 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 PPEF1O14829 653 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 HARSP12081 509 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 MYCLP12524 364 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 NMT1P30419 496 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 BIRC3Q13489 604 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 PPP4R3CPQ6ZMV5 832 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 PACS2Q86VP3 889 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 CCT8L2Q96SF2 557 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 PARVGQ9HBI0 331 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 INTS9Q9NV88 658 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 TMOD4Q9NZQ9 345 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 CHORDC1Q9UHD1 332 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 SPATA31A1Q5TZJ5 1347 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 DCCP43146 1447 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 TCP10L2B9ZVM9 353 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 MYO1FO00160 1098 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 AARSP49588 968 aaKnown RBP eCLIP7.42□□□□□ -1.225e-8■■■□□ 16.6
RTN4-203ENST00000357376 DRAP1Q14919 205 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 SLC30A10Q6XR72 485 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 USP38Q8NB14 1042 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 AENQ8WTP8 325 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 ZNF473Q8WTR7 871 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 TCP11Q8WWU5 503 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 CCDC17Q96LX7 622 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 SH2D3AQ9BRG2 576 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 EDEM3Q9BZQ6 932 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 USP21Q9UK80 565 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 STK38LQ9Y2H1 464 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 SIK3Q9Y2K2 1263 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 FRMD3A2A2Y4 597 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 GRID2IPA4D2P6 1211 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 RSPH10B2B2RC85 870 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 SORBS3O60504 671 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 RSPH10BP0C881 870 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 SLURP2P0DP57 97 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 DLATP10515 647 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 TAL1P17542 331 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 MDH1P40925 334 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 HDLBPQ00341 1268 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 CDK17Q00537 523 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 ACTN3Q08043 901 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 TRAF1Q13077 416 aa7.42□□□□□ -1.22
RTN4-203ENST00000357376 TRIP13Q15645 432 aaPredicted RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 FAM133BQ5BKY9 247 aaKnown RBP7.42□□□□□ -1.22
RTN4-203ENST00000357376 C10orf76Q5T2E6 689 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms