RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SFNP31947 248 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 SYCP1Q15431 976 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 ASCC2Q9H1I8 757 aaPredicted RBP28.39■■■□□ 2.13
CLK2-201ENST00000355560 NDST4Q9H3R1 872 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 ODF2LQ9ULJ1 636 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 AGTPBP1Q9UPW5 1226 aa28.39■■■□□ 2.13
CLK2-201ENST00000355560 EDRF1Q3B7T1 1238 aa28.38■■■□□ 2.13
CLK2-201ENST00000355560 PNMA8AQ86V59 439 aaPredicted RBP28.38■■■□□ 2.13
CLK2-201ENST00000355560 SPATC1LQ9H0A9 340 aa28.38■■■□□ 2.13
CLK2-201ENST00000355560 FBXO40Q9UH90 709 aa28.38■■■□□ 2.13
CLK2-201ENST00000355560 SOWAHDA6NJG2 315 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 GUCY2CP25092 1073 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 HOXD13P35453 343 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 KRT9P35527 623 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 BMT2Q1RMZ1 405 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 PAGR1Q9BTK6 254 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 MYH11P35749 1972 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 TTC26A0AVF1 554 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 ZNF131P52739 623 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 HERVK_113P62684 666 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 UGCGQ16739 394 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 CCDC40Q4G0X9 1142 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 PADI6Q6TGC4 694 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 ERGIC2Q96RQ1 377 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 TRAF3IP3Q9Y228 551 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 PFASO15067 1338 aa28.37■■■□□ 2.13
CLK2-201ENST00000355560 STAM2O75886 525 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 LYPLA2O95372 231 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 TRIM21P19474 475 aaKnown RBP28.36■■■□□ 2.13
CLK2-201ENST00000355560 KLK7P49862 253 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 TOGARAM2Q6ZUX3 1019 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 ZC3H3Q8IXZ2 948 aaKnown RBP28.36■■■□□ 2.13
CLK2-201ENST00000355560 PRIMPOLQ96LW4 560 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 SEL1LQ9UBV2 794 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 DBR1Q9UK59 544 aaKnown RBP28.36■■■□□ 2.13
CLK2-201ENST00000355560 KCNA2P16389 499 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 YWHABP31946 246 aaKnown RBP28.36■■■□□ 2.13
CLK2-201ENST00000355560 RARRES1P49788 294 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 TERF1P54274 439 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 ADAM9Q13443 819 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 GNPTABQ3T906 1256 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 NCAPG2Q86XI2 1143 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 DNERQ8NFT8 737 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 CDHR1Q96JP9 859 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 PCMTD1Q96MG8 357 aaPredicted RBP28.36■■■□□ 2.13
CLK2-201ENST00000355560 PPP2R2CQ9Y2T4 447 aa28.36■■■□□ 2.13
CLK2-201ENST00000355560 GNA14O95837 355 aa28.35■■■□□ 2.13
CLK2-201ENST00000355560 FECHP22830 423 aa28.35■■■□□ 2.13
CLK2-201ENST00000355560 NR2F2P24468 414 aa28.35■■■□□ 2.13
CLK2-201ENST00000355560 PSMC5P62195 406 aa28.35■■■□□ 2.13
CLK2-201ENST00000355560 CNTN2Q02246 1040 aa28.35■■■□□ 2.13
CLK2-201ENST00000355560 MTF1Q14872 753 aa28.35■■■□□ 2.13
CLK2-201ENST00000355560 ZNF746Q6NUN9 644 aaPredicted RBP28.35■■■□□ 2.13
CLK2-201ENST00000355560 ZSCAN12O43309 604 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 HIP1RO75146 1068 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 NMT1P30419 496 aaKnown RBP28.34■■■□□ 2.13
CLK2-201ENST00000355560 C4orf19Q8IY42 314 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 IWS1Q96ST2 819 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 NUP58Q9BVL2 599 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 CAPN11Q9UMQ6 739 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 CLEC11AQ9Y240 323 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 LUC7L2Q9Y383 392 aaKnown RBP28.34■■■□□ 2.13
CLK2-201ENST00000355560 ASTN1O14525 1302 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 DOCK5Q9H7D0 1870 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 PDXKO00764 312 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 EIF3DO15371 548 aaKnown RBP eCLIP28.34■■■□□ 2.13
CLK2-201ENST00000355560 KCNA1Q09470 495 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 ODR4Q5SWX8 454 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 ILDR2Q71H61 639 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 FAM178BQ8IXR5 827 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 RETREG2Q8NC44 543 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 RDM1Q8NG50 284 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 CCDC43Q96MW1 224 aaKnown RBP28.34■■■□□ 2.13
CLK2-201ENST00000355560 FIZ1Q96SL8 496 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 MOV10L1Q9BXT6 1211 aaKnown RBP28.34■■■□□ 2.13
CLK2-201ENST00000355560 TTYH3Q9C0H2 523 aa28.34■■■□□ 2.13
CLK2-201ENST00000355560 TYW1Q9NV66 732 aaKnown RBP28.34■■■□□ 2.13
CLK2-201ENST00000355560 CETN3O15182 167 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 CALUO43852 315 aaPredicted RBP28.33■■■□□ 2.13
CLK2-201ENST00000355560 POTEJP0CG39 1038 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 MOGSQ13724 837 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 ZNF592Q92610 1267 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 PCDHA10Q9Y5I2 948 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 MARSP56192 900 aaKnown RBP28.33■■■□□ 2.13
CLK2-201ENST00000355560 MAPK7Q13164 816 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 STXBP2Q15833 593 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 LDLRAD1Q5T700 205 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 RAD9BQ6WBX8 426 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 TRMT1LQ7Z2T5 733 aaKnown RBP28.33■■■□□ 2.13
CLK2-201ENST00000355560 SENP7Q9BQF6 1050 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 DESI2Q9BSY9 194 aa28.33■■■□□ 2.13
CLK2-201ENST00000355560 RASSF10A6NK89 507 aa28.32■■■□□ 2.12
CLK2-201ENST00000355560 CNMDO75829 334 aa28.32■■■□□ 2.12
CLK2-201ENST00000355560 ZC2HC1CQ53FD0 456 aaPredicted RBP28.32■■■□□ 2.12
CLK2-201ENST00000355560 UTP14CQ5TAP6 766 aaKnown RBP28.32■■■□□ 2.12
CLK2-201ENST00000355560 FASTKD5Q7L8L6 764 aaKnown RBP28.32■■■□□ 2.12
CLK2-201ENST00000355560 DAW1Q8N136 415 aa28.32■■■□□ 2.12
CLK2-201ENST00000355560 SH2D3AQ9BRG2 576 aa28.32■■■□□ 2.12
CLK2-201ENST00000355560 ZNF408Q9H9D4 720 aa28.32■■■□□ 2.12
CLK2-201ENST00000355560 JPH1Q9HDC5 661 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms