RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 HPCAL4Q9UM19 191 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 CTTNBP2Q8WZ74 1663 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 MAGI2Q86UL8 1455 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 PPP1R12AO14974 1030 aaPredicted RBP13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 SERPINB4P48594 390 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 DHX34Q14147 1143 aaKnown RBP13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 RASSF3Q86WH2 238 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
SYNCRIP-201ENST00000355238 LRRC53A6NM62 1247 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 EIF4E1BA6NMX2 242 aaKnown RBP13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 AP1B1Q10567 949 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 TOB2Q14106 344 aaPredicted RBP13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 LRRC24Q50LG9 513 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 ASPRV1Q53RT3 343 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 DNAAF3Q8N9W5 541 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 MMS19Q96T76 1030 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 DYNLT1P63172 113 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 TMEM154Q6P9G4 183 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 RNF169Q8NCN4 708 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 SENP1Q9P0U3 644 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 KPNA7A9QM74 516 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 GGPS1O95749 300 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 OCRLQ01968 901 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 ITKQ08881 620 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 MED21Q13503 144 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 CPXCR1Q8N123 301 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 TBCKQ8TEA7 893 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 DCTN4Q9UJW0 460 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 CLIC2O15247 247 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 KRT4P19013 534 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 MXI1P50539 228 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 IFRD2Q12894 506 aaPredicted RBP13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 TMEM259Q4ZIN3 620 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 HNRNPLLQ8WVV9 542 aaKnown RBP13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 RBM41Q96IZ5 413 aaKnown RBP13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 KCNA3P22001 575 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 EPHB1P54762 984 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 AGBL2Q5U5Z8 902 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 NACA2Q9H009 215 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 GDAQ9Y2T3 454 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 ANGPTL3Q9Y5C1 460 aa13.63□□□□□ -0.23
SYNCRIP-201ENST00000355238 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 MED7O43513 233 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 THOC5Q13769 683 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 CYLC2Q14093 348 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 IQCB1Q15051 598 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 LLGL1Q15334 1064 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 TBC1D23Q9NUY8 699 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 STK36Q9NRP7 1315 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 HNRNPDLO14979 420 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 LSP1P33241 339 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ADD2P35612 726 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 CCNI2Q6ZMN8 369 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 SLC26A7Q8TE54 656 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 SEC16BQ96JE7 1060 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 MED10Q9BTT4 135 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 SLC40A1Q9NP59 571 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 NVLO15381 856 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 IRAK1P51617 712 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 HP1BP3Q5SSJ5 553 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 TTC13Q8NBP0 860 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ATP6V1E2Q96A05 226 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 HOOK2Q96ED9 719 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 PNMA2Q9UL42 364 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 SNX12Q9UMY4 172 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 CFAP69A5D8W1 941 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 APOA1P02647 267 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 PGM1P36871 562 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 PSMC1P62191 440 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 KLC3Q6P597 504 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 FIS1Q9Y3D6 152 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 RNF103-CHMP3A0A140T963 221 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 FOXP2O15409 715 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 CHEK2O96017 543 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ARHGDIAP52565 204 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ALCAMQ13740 583 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 DNAJC9Q8WXX5 260 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 CALN1Q9BXU9 219 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ARHGAP26Q9UNA1 814 aa13.62□□□□□ -0.23
SYNCRIP-201ENST00000355238 ARL4AP40617 200 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms