RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CCDC17Q96LX7 622 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 YIPF2Q9BWQ6 316 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 A0A0G2JND7 137 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 MDM2Q00987 491 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 WDR75Q8IWA0 830 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 SCG3Q8WXD2 468 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 TM6SF1Q9BZW5 370 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 ACSL3O95573 720 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 B4GALNT2Q8NHY0 566 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 RABGGTAQ92696 567 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 COPEO14579 308 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 MAP3K10Q02779 954 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 DHX9Q08211 1270 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 PPHLN1Q8NEY8 458 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 EDC3Q96F86 508 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 RUBCNLQ9H714 662 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 ATG3Q9NT62 314 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 PBXIP1Q96AQ6 731 aa6.2□□□□□ -1.42
SRGAP1-201ENST00000355086 MAN2A1Q16706 1144 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PRDM5Q9NQX1 630 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 DNAJC6O75061 913 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 COPS2P61201 443 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 KRT72Q14CN4 511 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SYDE2Q5VT97 1194 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 RAB42Q8N4Z0 105 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 NGRNQ9NPE2 291 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 CLIC4Q9Y696 253 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 FKBP3Q00688 224 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SYT2Q8N9I0 419 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 BTBD18B2RXH4 712 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MEIS1O00470 390 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 TEX9Q8N6V9 391 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MAGEB5Q9BZ81 275 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 LGR6Q9HBX8 967 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 DNAJC17Q9NVM6 304 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SEMA3EO15041 775 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 ZRANB2O95218 330 aaKnown RBP eCLIP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SPARCL1Q14515 664 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 AFG1LQ8WV93 481 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 APOBEC2Q9Y235 224 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MAP3K1Q13233 1512 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GYG2O15488 501 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 NEK9Q8TD19 979 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MRFAP1L1Q96HT8 127 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 NDFIP2Q9NV92 336 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SETD1BQ9UPS6 1966 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 USP19O94966 1318 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PSAPP07602 524 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 HSPA1AP0DMV8 641 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 HSPA1BP0DMV9 641 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 CA4P22748 312 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 TADA2BQ86TJ2 420 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 BMP3P12645 472 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MED21Q13503 144 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 RNF135Q8IUD6 432 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SYNDIG1Q9H7V2 258 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SEL1LQ9UBV2 794 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 FGAP02671 866 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GNAT1P11488 350 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 CASP14P31944 242 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SLC10A5Q5PT55 438 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SH3KBP1Q96B97 665 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 TSR3Q9UJK0 312 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 EIF4G3O43432 1585 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GDF11O95390 407 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MRPL28Q13084 256 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PCDHA4Q9UN74 947 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 RNF103-CHMP3A0A140T963 221 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 COPG1Q9Y678 874 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 DCTN3O75935 186 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 CCDC159P0C7I6 412 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 FAM180AQ6UWF9 173 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 URGCPQ8TCY9 931 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 K7ERI5 159 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PRPF4O43172 522 aaKnown RBP eCLIP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GSPT1P15170 499 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GUCY2CP25092 1073 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 IREB2P48200 963 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 STXBP2Q15833 593 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 ASIC4Q96FT7 647 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PPEF1O14829 653 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 DYDC2Q96IM9 177 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 EGFL8Q99944 293 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 FOXP1Q9H334 677 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 AFF4Q9UHB7 1163 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 DENND3A2RUS2 1198 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GSNP06396 782 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 CACNB1Q02641 598 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 ZNF804BA4D1E1 1349 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 GCFC2P16383 781 aaKnown RBP6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PJA2O43164 708 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 FTCDO95954 541 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 APOA1P02647 267 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 SP110Q9HB58 689 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 TMEM63CQ9P1W3 806 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 UBXN8O00124 270 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 PIDD1Q9HB75 910 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 MYO1DO94832 1006 aa6.19□□□□□ -1.42
SRGAP1-201ENST00000355086 HDLBPQ00341 1268 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms