RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 DNAJC7Q99615 494 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 CAPS2Q9BXY5 557 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 TDRD3Q9H7E2 651 aaKnown RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 ABCC4O15439 1325 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 GH2P01242 217 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 MAGEB10Q96LZ2 347 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 TTC7AQ9ULT0 858 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 ZBTB1Q9Y2K1 713 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 K7ERI5 159 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 C2CD2LO14523 706 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 CTSHP09668 335 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 SH3RF3Q8TEJ3 882 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 KIF17Q9P2E2 1029 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 KLHL8Q9P2G9 620 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 PCDHA4Q9UN74 947 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 TMEM94Q12767 1356 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 E2F8A0AVK6 867 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 MMP10P09238 476 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 H2AFZP0C0S5 128 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 NR5A1Q13285 461 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 CDC37Q16543 378 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 H2AFVQ71UI9 128 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 EGFL8Q99944 293 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 POLR3CQ9BUI4 534 aaPredicted RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 SYTL2Q9HCH5 934 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 COPB1P53618 953 aaKnown RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 MAP3K21Q5TCX8 1036 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 ADCK2Q7Z695 626 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 EFCAB13Q8IY85 973 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 NRBP1Q9UHY1 535 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 ZBED1O96006 694 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 PSMC1P62191 440 aaKnown RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 MFSD4BQ5TF39 518 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ASIC4Q96FT7 647 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 MMP19Q99542 508 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 DSCC1Q9BVC3 393 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 INTS9Q9NV88 658 aaKnown RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 IMPACTQ9P2X3 320 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ADCY9O60503 1353 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 WDR17Q8IZU2 1322 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 E2F6O75461 281 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 CIITAP33076 1130 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 CCT5P48643 541 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 PKP1Q13835 747 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 MLXIPLQ9NP71 852 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ZSCAN32Q9NX65 697 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 MAP3K15Q6ZN16 1313 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ZNF233A6NK53 670 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 HIP1RO75146 1068 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 EEF1DP29692 281 aaKnown RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 VMP1Q96GC9 406 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 DYRK4Q9NR20 520 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 NPHP4O75161 1426 aaPredicted RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ERVV-2B6SEH9 535 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 MT-ND3P03897 115 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 HIF1AQ16665 826 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ARL13BQ3SXY8 428 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 PRAMEF18Q5VWM3 479 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 SLC35F6Q8N357 371 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 TCP11Q8WWU5 503 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 GPBP1L1Q9HC44 474 aaPredicted RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 PDE11AQ9HCR9 933 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 HOMER3Q9NSC5 361 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 PCSK1NQ9UHG2 260 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 KCNG1Q9UIX4 513 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 GPATCH8Q9UKJ3 1502 aaKnown RBP10.73□□□□□ -0.69
COL11A1-201ENST00000353414 RSPH10B2B2RC85 870 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 H0YCG3 227 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 RSPH10BP0C881 870 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 TBX22Q9Y458 520 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 GRIK1P39086 918 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 KLC3Q6P597 504 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 Q9H521 79 aa10.73□□□□□ -0.69
COL11A1-201ENST00000353414 AP1ARQ63HQ0 302 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 PHLDB3Q6NSJ2 640 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.72□□□□□ -0.69
COL11A1-201ENST00000353414 TTC17Q96AE7 1141 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 PCDHA7Q9UN72 937 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 SUPT3HB4E1H0 165 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 KIAA1755Q5JYT7 1200 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ANKRD40Q6AI12 368 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 CCDC90BQ9GZT6 254 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 SNAP23O00161 211 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ARL4DP49703 201 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ZNF568Q3ZCX4 644 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ANKRD20A4Q4UJ75 823 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ANKRD20A8PQ5CZ79 823 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ANKRD20A2Q5SQ80 823 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ANKRD20A1Q5TYW2 823 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 ERICH1Q86X53 443 aa10.72□□□□□ -0.69
COL11A1-201ENST00000353414 SMAP1Q8IYB5 467 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms