RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 KIAA0391O15091 583 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 GLRX3O76003 335 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 MTA2O94776 668 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 GJB6O95452 261 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 CAPN2P17655 700 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 CHMLP26374 656 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 CYP2C19P33261 490 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 MPP3Q13368 585 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 IQCEQ6IPM2 695 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 ETFRF1Q6IPR1 90 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 FOXR2Q6PJQ5 311 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 MICALCLQ6ZW33 695 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 TMC6Q7Z403 805 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 SEPT12Q8IYM1 358 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 SYNPOQ8N3V7 929 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 JMYQ8N9B5 988 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 LEMD2Q8NC56 503 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 RHBDD1Q8TEB9 315 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 POMGNT1Q8WZA1 660 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 FCGR1BQ92637 280 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 MAP3K20Q9NYL2 800 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 IPO11Q9UI26 975 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 TSPYL4Q9UJ04 414 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 DSEQ9UL01 958 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.5□□□□□ -1.371e-7■■■■□ 19.8
RFC1-201ENST00000349703 RNF17Q9BXT8 1623 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.37
RFC1-201ENST00000349703 SURF6O75683 361 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 ME1P48163 572 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 KIF11P52732 1056 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 MTTPP55157 894 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 DDR2Q16832 855 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 CCDC158Q5M9N0 1113 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 OTOP2Q7RTS6 562 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 PPIL6Q8IXY8 311 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 DIS3LQ8TF46 1054 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 NOX5Q96PH1 765 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 WDR12Q9GZL7 423 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 REXO4Q9GZR2 422 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 COQ3Q9NZJ6 369 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 RABGEF1Q9UJ41 708 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 PCDHGA3Q9Y5H0 932 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 NOS1P29475 1434 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 J3QW42 95 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 SCDO00767 359 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 KPNA5O15131 536 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 GNRH1P01148 92 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 MRPL28Q13084 256 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 STK38Q15208 465 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 KAZNQ674X7 775 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 ANKRD40Q6AI12 368 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 ATL3Q6DD88 541 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 WFDC8Q8IUA0 241 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 CEP112Q8N8E3 955 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 PSPC1Q8WXF1 523 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 TRIM54Q9BYV2 358 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 ATP6V1HQ9UI12 483 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 TPCN1Q9ULQ1 816 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 SPECC1L-ADORA2AF8WAN1 911 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 OAS2P29728 719 aaKnown RBP6.5□□□□□ -1.37
RFC1-201ENST00000349703 BLMHQ13867 455 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 AGAP9Q5VTM2 703 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 KIAA2013Q8IYS2 634 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 CNTD1Q8N815 330 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 SUV39H2Q9H5I1 410 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 PLEKHA5Q9HAU0 1116 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 TRPM2O94759 1503 aa6.5□□□□□ -1.37
RFC1-201ENST00000349703 ANKRD18BA2A2Z9 1011 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 KRT87PA6NCN2 255 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 EFCAB8A8MWE9 144 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 PDE2AO00408 941 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 AKR1B10O60218 316 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 GLB1P16278 677 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 SMTNP53814 917 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 HNRNPH2P55795 449 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 CPLX2Q6PUV4 134 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 SYT10Q6XYQ8 523 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 LRRC8AQ8IWT6 810 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 GPR161Q8N6U8 529 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 PTCD2Q8WV60 388 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 UBLCP1Q8WVY7 318 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 TIFAQ96CG3 184 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 RBM17Q96I25 401 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 SLC2A13Q96QE2 648 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ADD3Q9UEY8 706 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 CDC23Q9UJX2 597 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 MADDQ8WXG6 1647 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 STRNO43815 780 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TLL1O43897 1013 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TOP1P11387 765 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 RECQLP46063 649 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 MASP1P48740 699 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TAZQ16635 292 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 THEMIS2Q5TEJ8 643 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms