RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 DKC1O60832 514 aaKnown RBP eCLIP12.2□□□□□ -0.46
ECM1-201ENST00000346569 FARP2O94887 1054 aaPredicted RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 SNAI1O95863 264 aaPredicted RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 SUPT20HL2P0C7V6 817 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 GUCY2CP25092 1073 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 YWHABP31946 246 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 ZNF131P52739 623 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 FANCCQ00597 558 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 RAD51AP2Q09MP3 1159 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 FAM26FQ5R3K3 315 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 ARMCX2Q7L311 632 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 IRF2BP1Q8IU81 584 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 CCDC60Q8IWA6 550 aaPredicted RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 USP6NLQ92738 828 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 KATNBL1Q9H079 304 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 TCEAL9Q9UHQ7 104 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 CTNND2Q9UQB3 1225 aa12.2□□□□□ -0.46
ECM1-201ENST00000346569 MAFBQ9Y5Q3 323 aaPredicted RBP12.2□□□□□ -0.46
ECM1-201ENST00000346569 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 RSPH10B2B2RC85 870 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 PSMA7O14818 248 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 CA12O43570 354 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
ECM1-201ENST00000346569 RSPH10BP0C881 870 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 ATP4AP20648 1035 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 CDC25BP30305 580 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 VEGFBP49765 207 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 MAPK7Q13164 816 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 CELF3Q5SZQ8 465 aaKnown RBP12.19□□□□□ -0.46
ECM1-201ENST00000346569 ANKRD40Q6AI12 368 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 MIS18BP1Q6P0N0 1132 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 METTL7BQ6UX53 244 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 ANO5Q75V66 913 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
ECM1-201ENST00000346569 APTXQ7Z2E3 356 aaKnown RBP12.19□□□□□ -0.46
ECM1-201ENST00000346569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.19□□□□□ -0.46
ECM1-201ENST00000346569 DPP9Q86TI2 863 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 DAW1Q8N136 415 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 NPLOC4Q8TAT6 608 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 SEPT1Q8WYJ6 367 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 P2RX5Q93086 422 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 MAML3Q96JK9 1138 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
ECM1-201ENST00000346569 FIZ1Q96SL8 496 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 PCYT2Q99447 389 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 FGFBP2Q9BYJ0 223 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 PDLIM7Q9NR12 457 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 PDGFCQ9NRA1 345 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 GJD2Q9UKL4 321 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 ODF2LQ9ULJ1 636 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 COL4A3BPQ9Y5P4 624 aa12.19□□□□□ -0.46
ECM1-201ENST00000346569 SYNRGQ9UMZ2 1314 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 TRIM49BA6NDI0 452 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 GGPS1O95749 300 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 IGHA2P01877 340 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 HOXC6P09630 235 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 GAP43P17677 238 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 NPEPPSP55786 919 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 LRRC41Q15345 812 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 OTUD6AQ7L8S5 288 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
ECM1-201ENST00000346569 MSL3Q8N5Y2 521 aaKnown RBP12.18□□□□□ -0.46
ECM1-201ENST00000346569 ATP6V0A1Q93050 837 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
ECM1-201ENST00000346569 IFNKQ9P0W0 207 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 SEL1LQ9UBV2 794 aa12.18□□□□□ -0.46
ECM1-201ENST00000346569 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 BICDL2A1A5D9 508 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 TMEM150BA6NC51 233 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 SORBS3O60504 671 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 TXNP10599 105 aaKnown RBP12.17□□□□□ -0.46
ECM1-201ENST00000346569 CDK11BP21127 795 aaKnown RBP12.17□□□□□ -0.46
ECM1-201ENST00000346569 UBASH3AP57075 661 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 CRHR2Q13324 411 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 TTLL4Q14679 1199 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 DEFB115Q30KQ5 88 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 ZCWPW2Q504Y3 356 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 HS1BP3Q53T59 392 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 XKR3Q5GH77 459 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 COL13A1Q5TAT6 717 aaPredicted RBP12.17□□□□□ -0.46
ECM1-201ENST00000346569 SFR1Q86XK3 245 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 ZNF507Q8TCN5 953 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms