RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 CEP104O60308 925 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
CLCN2-202ENST00000344937 KCNMA1Q12791 1236 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 RAD51CO43502 376 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 TLR2O60603 784 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 CRYMQ14894 314 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 EMBQ6PCB8 327 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 KRT25Q7Z3Z0 450 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 KIRREL3Q8IZU9 778 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 PNMA5Q96PV4 448 aa17.16■□□□□ 0.34
CLCN2-202ENST00000344937 COL4A5P29400 1685 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 CLRN2A0PK11 232 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 KRT18P05783 430 aaKnown RBP17.15■□□□□ 0.34
CLCN2-202ENST00000344937 NR1D1P20393 614 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 TMOD1P28289 359 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 LSP1P33241 339 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 HDLBPQ00341 1268 aaKnown RBP17.15■□□□□ 0.34
CLCN2-202ENST00000344937 KLHL30Q0D2K2 578 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 ECM1Q16610 540 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 FMNL3Q8IVF7 1028 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 PLAAQ9Y263 795 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
CLCN2-202ENST00000344937 RTN2O75298 545 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 SLC16A2P36021 539 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 CCNHP51946 323 aaPredicted RBP17.15■□□□□ 0.34
CLCN2-202ENST00000344937 TCERG1LQ5VWI1 586 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 TSG101Q99816 390 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 SH3GL2Q99962 352 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 SH3GLB2Q9NR46 395 aa17.15■□□□□ 0.34
CLCN2-202ENST00000344937 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
CLCN2-202ENST00000344937 E9PMD0 336 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 GNA11P29992 359 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 B4GALNT4Q76KP1 1039 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 PDHBP11177 359 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 IRX1P78414 480 aaPredicted RBP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 UBLCP1Q8WVY7 318 aaPredicted RBP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 TAF4BQ92750 862 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 DDX47Q9H0S4 455 aaKnown RBP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 KLHL33A6NCF5 533 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 SMIM23A6NLE4 172 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 MYL1P05976 194 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 PAK2Q13177 524 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 UNC13DQ70J99 1090 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 CEP57Q86XR8 500 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 CALR3Q96L12 384 aaKnown RBP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 ZMYND12Q9H0C1 365 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 SERPINA10Q9UK55 444 aa17.14■□□□□ 0.33
CLCN2-202ENST00000344937 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLCN2-202ENST00000344937 A0A1W2PQJ5 194 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 GDF11O95390 407 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 DCAF17Q5H9S7 520 aaPredicted RBP17.13■□□□□ 0.33
CLCN2-202ENST00000344937 HGSNATQ68CP4 663 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 AK8Q96MA6 479 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 RASSF9O75901 435 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
CLCN2-202ENST00000344937 TTBK2Q6IQ55 1244 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 DPH5Q9H2P9 285 aa17.13■□□□□ 0.33
CLCN2-202ENST00000344937 GOLGA6L10A6NI86 522 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 SKAP2O75563 359 aaPredicted RBP17.12■□□□□ 0.33
CLCN2-202ENST00000344937 CLNS1AP54105 237 aaKnown RBP17.12■□□□□ 0.33
CLCN2-202ENST00000344937 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
CLCN2-202ENST00000344937 ALS2CLQ60I27 953 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 LRRC55Q6ZSA7 311 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 ZNF646O15015 1829 aaPredicted RBP17.12■□□□□ 0.33
CLCN2-202ENST00000344937 IGKV6D-41A0A0C4DH26 115 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 SMTNP53814 917 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 FKBP1AP62942 108 aaKnown RBP17.12■□□□□ 0.33
CLCN2-202ENST00000344937 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 SPAG5Q96R06 1193 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 MEIS1O00470 390 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 TTLL1O95922 423 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 COPB2P35606 906 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 PRPHP41219 470 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 ZNF662Q6ZS27 426 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 CUEDC2Q9H467 287 aa17.12■□□□□ 0.33
CLCN2-202ENST00000344937 LAD1O00515 517 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 STAT3P40763 770 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 NT5C2P49902 561 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 COASYQ13057 564 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 FIGNQ5HY92 759 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 FAM26FQ5R3K3 315 aa17.11■□□□□ 0.33
CLCN2-202ENST00000344937 RSBN1LQ6PCB5 846 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms